Mutant Information 

Mutant NameFN-106  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 25

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr112333026C-THETUTR_3_PRIME
SBS  Chr122755437A-CHETUTR_5_PRIME
SBS  Chr123986524C-THETINTERGENIC
SBS  Chr133440705T-GHETINTERGENIC
SBS  Chr136633408C-THETINTERGENIC
SBS  Chr1013155865G-AHETINTERGENIC
SBS  Chr1012407415C-THOMOINTERGENIC
SBS  Chr102047711C-GHETINTRON
SBS  Chr1212219729G-AHOMOINTRON
SBS  Chr233193726G-AHETSYNONYMOUS_CODING
SBS  Chr214819694T-CHETINTERGENIC
SBS  Chr218650638T-AHOMOINTRON
SBS  Chr228833446G-AHETUTR_5_PRIME
SBS  Chr32781255G-AHETINTERGENIC
SBS  Chr39466602C-AHETINTERGENIC
SBS  Chr329948832C-THETINTERGENIC
SBS  Chr412747430C-THETINTERGENIC
SBS  Chr529040113C-THETINTRON
SBS  Chr523348767G-CHOMOSYNONYMOUS_CODING
SBS  Chr519150984A-GHOMOINTRON
SBS  Chr61814137T-AHOMOINTERGENIC
SBS  Chr714337240G-AHETNON_SYNONYMOUS_CODINGLOC_Os07g25100
SBS  Chr810710137A-THOMOINTERGENIC
SBS  Chr820365134A-THOMOINTRON
SBS  Chr910154282C-THETNON_SYNONYMOUS_CODINGLOC_Os09g16540

Deletions: 16

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr1122738124227381295
Deletion  Chr11327914032791433LOC_Os11g06720
Deletion  Chr234942405349424149LOC_Os02g57070
Deletion  Chr22593700125974000370007
Deletion  Chr3161428291614284011
Deletion  Chr3125457861254580519
Deletion  Chr331006389310063934LOC_Os03g54084
Deletion  Chr43223400132247000130004
Deletion  Chr517874736178747437
Deletion  Chr516852794168527951
Deletion  Chr52119176521191937172
Deletion  Chr5290462742904630329LOC_Os05g50660
Deletion  Chr626838830268388388
Deletion  Chr619779675197796783
Deletion  Chr7660619966062001
Deletion  Chr922236227222362358

Insertions: 5

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr1015545794155457941
Insertion  Chr3738815873881582
Insertion  Chr519586896195868961
Insertion  Chr7412457341245732
Insertion  Chr9949546694954662

Inversions: 4

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr31336536513469370LOC_Os03g23110
Inversion  Chr43092467731071998LOC_Os04g52060
Inversion  Chr43092467731071998LOC_Os04g52280
Inversion  Chr82637895026478393

Translocations: 2

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr1221334241Chr816879884LOC_Os12g35060
Translocation  Chr1221334273Chr816878302LOC_Os12g35060