Mutant Information 

Mutant NameFN-107  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 26

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr124260944A-GHETINTERGENIC
SBS  Chr141049796A-GHETINTERGENIC
SBS  Chr138585867T-CHETNON_SYNONYMOUS_CODINGLOC_Os01g66460
SBS  Chr137173534A-GHOMOINTERGENIC
SBS  Chr129715640C-THETINTERGENIC
SBS  Chr128704818C-GHETINTRON
SBS  Chr128683279G-THETINTERGENIC
SBS  Chr125999769T-CHETINTERGENIC
SBS  Chr103026808C-THOMOINTERGENIC
SBS  Chr122960313A-THETNON_SYNONYMOUS_CODINGLOC_Os12g06230
SBS  Chr1210607271C-GHETINTRON
SBS  Chr211846728C-THETSTOP_GAINEDLOC_Os02g20110
SBS  Chr222798642A-GHETNON_SYNONYMOUS_CODINGLOC_Os02g37790
SBS  Chr219470805A-GHETINTERGENIC
SBS  Chr320972917G-THETINTERGENIC
SBS  Chr424369605G-AHOMONON_SYNONYMOUS_CODINGLOC_Os04g41090
SBS  Chr423144813C-AHOMOINTERGENIC
SBS  Chr428748525G-AHETINTERGENIC
SBS  Chr56217439C-THETINTERGENIC
SBS  Chr514916725C-THETINTERGENIC
SBS  Chr52672429C-THETINTERGENIC
SBS  Chr58284673C-AHETINTERGENIC
SBS  Chr61140837G-THOMOINTERGENIC
SBS  Chr720349655A-THOMOINTERGENIC
SBS  Chr720866418C-THOMOINTERGENIC
SBS  Chr96550088A-THETINTERGENIC

Deletions: 14

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr110055863100558674
Deletion  Chr1029870013024000370007
Deletion  Chr111563000156302424LOC_Os11g03910
Deletion  Chr1119259794192598017
Deletion  Chr1116893710168937155
Deletion  Chr217842556178425571LOC_Os02g30040
Deletion  Chr322151557221515581LOC_Os03g39830
Deletion  Chr416208608162086091LOC_Os04g27420
Deletion  Chr619938715199387161
Deletion  Chr743976443977915LOC_Os07g01740
Deletion  Chr727941446279414471
Deletion  Chr855170015529000120003
Deletion  Chr911501325115013261
Deletion  Chr916657489166574901

Insertions: 4

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr133401530334015302
Insertion  Chr10351568935156891LOC_Os10g06760
Insertion  Chr312018148120181481
Insertion  Chr826498780264987801

Inversions: 7

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr12034591720479134
Inversion  Chr1030241443309159
Inversion  Chr22968033130682755
Inversion  Chr22968034330682764
Inversion  Chr855170335717216LOC_Os08g09900
Inversion  Chr855290065722597LOC_Os08g09910
Inversion  Chr82407725524237606

Translocations: 4

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr61887456Chr128698932LOC_Os06g04399
Translocation  Chr61887458Chr128683068LOC_Os06g04399
Translocation  Chr85722353Chr624744283LOC_Os08g09910
Translocation  Chr85722561Chr624744303LOC_Os08g09910