Mutant Information 

Mutant NameFN-110  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 22

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr1224169800G-THETSYNONYMOUS_CODING
SBS  Chr1219893829T-AHETINTERGENIC
SBS  Chr1211802849C-GHETNON_SYNONYMOUS_CODINGLOC_Os12g20240
SBS  Chr1210006044G-AHETINTERGENIC
SBS  Chr23959736T-AHOMOINTERGENIC
SBS  Chr24457128C-AHOMOINTRON
SBS  Chr26193169C-THOMONON_SYNONYMOUS_CODINGLOC_Os02g11940
SBS  Chr213197278T-CHETINTERGENIC
SBS  Chr315814378G-AHOMOINTERGENIC
SBS  Chr331622731C-AHOMOINTERGENIC
SBS  Chr334698358C-THOMOINTERGENIC
SBS  Chr39233155G-AHOMOINTERGENIC
SBS  Chr427406812A-GHETINTERGENIC
SBS  Chr414877158T-CHETINTERGENIC
SBS  Chr43098140C-GHETINTRON
SBS  Chr41606443G-THETINTRON
SBS  Chr523816762T-AHETINTERGENIC
SBS  Chr524103234T-CHETINTERGENIC
SBS  Chr523816763C-THETINTERGENIC
SBS  Chr611282523T-CHETINTERGENIC
SBS  Chr817927625C-THETNON_SYNONYMOUS_CODINGLOC_Os08g29240
SBS  Chr912915563A-THETINTERGENIC

Deletions: 21

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr1349914783499150123
Deletion  Chr1312528223125284422LOC_Os01g54300
Deletion  Chr1309929973099303235
Deletion  Chr107563375756340833
Deletion  Chr1018086007180860125
Deletion  Chr11290805929080601LOC_Os11g06110
Deletion  Chr1219557997195579981LOC_Os12g32430
Deletion  Chr1220916717209167181
Deletion  Chr2898871189887154
Deletion  Chr233557193335571952
Deletion  Chr23414351341437221
Deletion  Chr3113343121133433927
Deletion  Chr332813842328138464
Deletion  Chr425650165256501738LOC_Os04g43380
Deletion  Chr4687751368775196
Deletion  Chr521616692216166931
Deletion  Chr6101673910167445
Deletion  Chr7863037986303845
Deletion  Chr7862947286294742
Deletion  Chr81207500112124000490007
Deletion  Chr9129155281291555224

Insertions: 4

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr1019581250195812504
Insertion  Chr11789706278970621
Insertion  Chr3309130130913011
Insertion  Chr9951987395198731

Inversions: 2

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr32502004625101097
Inversion  Chr32502007025101110