Mutant Information 

Mutant NameFN-112  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 22

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr16889628C-THETNON_SYNONYMOUS_CODINGLOC_Os01g12530
SBS  Chr137686383G-THETINTRON
SBS  Chr1015761109G-THETINTERGENIC
SBS  Chr109442230C-THOMOINTERGENIC
SBS  Chr1114928661T-CHETNON_SYNONYMOUS_CODINGLOC_Os11g26090
SBS  Chr2781544G-THETNON_SYNONYMOUS_CODINGLOC_Os02g02350
SBS  Chr222498078T-AHETINTRON
SBS  Chr37488583T-CHOMOINTERGENIC
SBS  Chr331060302A-GHOMOINTERGENIC
SBS  Chr33849656C-THETINTERGENIC
SBS  Chr419045630C-THOMOINTRON
SBS  Chr425353224G-CHETNON_SYNONYMOUS_CODINGLOC_Os04g42840
SBS  Chr430800334G-AHETNON_SYNONYMOUS_CODINGLOC_Os04g51910
SBS  Chr520369899T-AHOMOINTERGENIC
SBS  Chr525793312C-THETNON_SYNONYMOUS_CODINGLOC_Os05g44320
SBS  Chr59911327G-AHOMOSYNONYMOUS_CODING
SBS  Chr620211010G-AHOMOINTERGENIC
SBS  Chr78617388C-AHETSYNONYMOUS_CODING
SBS  Chr718745419G-THOMOINTERGENIC
SBS  Chr810461830G-THETINTERGENIC
SBS  Chr817498743G-AHOMOSYNONYMOUS_CODING
SBS  Chr922333252A-GHETSYNONYMOUS_CODING

Deletions: 18

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr131802408318024124
Deletion  Chr145463764546777401LOC_Os01g09030
Deletion  Chr1014905974149059751
Deletion  Chr1021667689216676978LOC_Os10g40460
Deletion  Chr1049493354963463141283
Deletion  Chr11315117931511801
Deletion  Chr11264276426427717
Deletion  Chr119010936901094812
Deletion  Chr12256304462563050458
Deletion  Chr232042588320443231735LOC_Os02g52340
Deletion  Chr217293293172932985
Deletion  Chr320408212204082153
Deletion  Chr36633190663320616
Deletion  Chr424270520242705299
Deletion  Chr7217265021726511LOC_Os07g04910
Deletion  Chr820757942207579464
Deletion  Chr8244746742447468511
Deletion  Chr8143458261434584519

Insertions: 5

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr11509006750900674
Insertion  Chr212353499123534994
Insertion  Chr312521450125214501
Insertion  Chr6756193175619311
Insertion  Chr617986821179868211

Inversions: 1

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr72328170723602389LOC_Os07g39400

Translocations: 3

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr104962733Chr26159495LOC_Os02g11890
Translocation  Chr104963446Chr26159483LOC_Os02g11890
Translocation  Chr817545913Chr49596826