Mutant Information 

Mutant NameFN-115  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 33

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr114246096A-CHOMONON_SYNONYMOUS_CODINGLOC_Os01g25210
SBS  Chr142287692C-AHETINTERGENIC
SBS  Chr141845456C-AHETUTR_3_PRIME
SBS  Chr141199212T-AHOMOINTERGENIC
SBS  Chr126418162G-THOMOINTERGENIC
SBS  Chr125964439G-AHETINTERGENIC
SBS  Chr124844740C-THETINTRON
SBS  Chr124375631T-CHETINTERGENIC
SBS  Chr1010305316C-THOMOINTERGENIC
SBS  Chr1010269288C-THOMOINTERGENIC
SBS  Chr1112978609C-AHETNON_SYNONYMOUS_CODINGLOC_Os11g22570
SBS  Chr116226827A-THETINTERGENIC
SBS  Chr1216440150C-THETNON_SYNONYMOUS_CODINGLOC_Os12g27880
SBS  Chr217481969G-AHETINTERGENIC
SBS  Chr333465861A-THOMOINTERGENIC
SBS  Chr34487613T-CHOMOINTRON
SBS  Chr331187547T-GHOMOINTRON
SBS  Chr317954274G-THETINTERGENIC
SBS  Chr323921279A-GHOMOINTERGENIC
SBS  Chr411684108A-THETINTRON
SBS  Chr41351102C-AHOMOINTERGENIC
SBS  Chr43298721A-CHETINTRON
SBS  Chr419809727A-GHETINTERGENIC
SBS  Chr424429411C-THETINTERGENIC
SBS  Chr521351356C-THETINTERGENIC
SBS  Chr624377401G-AHOMOINTERGENIC
SBS  Chr7177475C-THETINTERGENIC
SBS  Chr720336013A-GHETINTERGENIC
SBS  Chr84496565C-AHOMOINTERGENIC
SBS  Chr827746761C-THOMOINTERGENIC
SBS  Chr818063115C-THETINTRON
SBS  Chr922906575A-GHETINTERGENIC
SBS  Chr912892754G-THOMOINTERGENIC

Deletions: 11

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr141209597412095981
Deletion  Chr125026817250268181LOC_Os01g43670
Deletion  Chr12495678425014094573107
Deletion  Chr130298741302987443
Deletion  Chr10359639735963992LOC_Os10g06910
Deletion  Chr2465754346575441
Deletion  Chr227089880270898811
Deletion  Chr328454457284544581
Deletion  Chr425634510256345133
Deletion  Chr419488433194884418
Deletion  Chr8449170844917102

Insertions: 4

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr224179472241794722
Insertion  Chr315899900158999002
Insertion  Chr43129933129932
Insertion  Chr6311721031172101

Inversions: 3

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr51046578311791822LOC_Os05g20150
Inversion  Chr51179182017616206LOC_Os05g20150
Inversion  Chr51179182017616206LOC_Os05g30390

Translocations: 2

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr917554971Chr110829049
Translocation  Chr917557328Chr110829129LOC_Os09g28890