Mutant Information 

Mutant NameFN-116  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 14

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr114927163T-AHETINTRON
SBS  Chr123876557G-AHETINTERGENIC
SBS  Chr130556999C-THOMOINTRON
SBS  Chr143193682C-THETINTERGENIC
SBS  Chr1017685762C-AHETINTERGENIC
SBS  Chr1110378174G-AHOMOINTERGENIC
SBS  Chr125183125G-AHOMONON_SYNONYMOUS_CODINGLOC_Os12g09780
SBS  Chr334037465G-THETINTERGENIC
SBS  Chr324899797G-AHETINTERGENIC
SBS  Chr323667437G-AHETSTOP_GAINEDLOC_Os03g42530
SBS  Chr518861328A-GHOMOINTERGENIC
SBS  Chr827939591C-THETINTRON
SBS  Chr95844562T-AHETINTERGENIC
SBS  Chr97323076G-THETINTERGENIC

Deletions: 11

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr135138187351381881
Deletion  Chr1017953766179537693
Deletion  Chr11764929176492965LOC_Os11g13860
Deletion  Chr334732582347325908
Deletion  Chr4300641993006422122LOC_Os04g50820
Deletion  Chr5132082813208324
Deletion  Chr520164638201646413
Deletion  Chr628358714283587162
Deletion  Chr617673586176735904
Deletion  Chr911924207119242125
Deletion  Chr921152341211523487

Insertions: 2

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr1123752413237524131
Insertion  Chr621372446213724466LOC_Os06g36390

Inversions: 2

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr1634892010914661LOC_Os01g19290
Inversion  Chr495775039629202