Mutant Information 

Mutant NameFN-117  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 21

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr112748987T-AHETINTERGENIC
SBS  Chr113985196C-THOMONON_SYNONYMOUS_CODINGLOC_Os01g24830
SBS  Chr117847249A-THETINTRON
SBS  Chr140472121C-AHOMOINTERGENIC
SBS  Chr1021101407C-THOMOINTERGENIC
SBS  Chr1115371721C-THETINTERGENIC
SBS  Chr125691925G-AHOMOINTERGENIC
SBS  Chr220147117G-AHETINTERGENIC
SBS  Chr233168769A-THETINTRON
SBS  Chr233168770A-THETINTRON
SBS  Chr331900522G-AHETINTERGENIC
SBS  Chr427261419C-THOMOINTRON
SBS  Chr414642560G-AHOMOINTERGENIC
SBS  Chr410429411G-CHETINTERGENIC
SBS  Chr510430129G-THETSYNONYMOUS_CODING
SBS  Chr55799478C-THETSYNONYMOUS_CODING
SBS  Chr621172617A-CHETINTERGENIC
SBS  Chr721219739C-AHOMOINTERGENIC
SBS  Chr710674140G-AHOMONON_SYNONYMOUS_CODINGLOC_Os07g18030
SBS  Chr87853624C-AHETINTERGENIC
SBS  Chr911639168C-GHETINTERGENIC

Deletions: 19

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr120656284206562873
Deletion  Chr111456539714565599202
Deletion  Chr1219487424194874262
Deletion  Chr1210703131107031343
Deletion  Chr1223909752239097553
Deletion  Chr2213812772138128710
Deletion  Chr2240639522406396513
Deletion  Chr3257880772578808710
Deletion  Chr399726499972995346LOC_Os03g17900
Deletion  Chr420685869206858734
Deletion  Chr411382858113828591LOC_Os04g20340
Deletion  Chr4285813492858140859
Deletion  Chr618089306180893093
Deletion  Chr623087523230875285
Deletion  Chr6230950932309513845LOC_Os06g38930
Deletion  Chr721742080217420822
Deletion  Chr817767328177673379LOC_Os08g29020
Deletion  Chr96983199698321011
Deletion  Chr911959828119598324

Insertions: 5

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr1116367368163673682
Insertion  Chr6491508049150801
Insertion  Chr6542790454279041
Insertion  Chr713017447130174471
Insertion  Chr728173836281738361

Inversions: 1

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr21546132815483742LOC_Os02g26370

Translocations: 3

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr54813987Chr399726532
Translocation  Chr39585679Chr14749093
Translocation  Chr39593506Chr14749113LOC_Os03g17210