Mutant Information 

Mutant NameFN-12  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 8

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr104533516G-THomoNON_SYNONYMOUS_CODINGLOC_Os10g08360
SBS  Chr21621900C-THomoNON_SYNONYMOUS_CODINGLOC_Os02g03840
SBS  Chr210756605C-THETINTERGENIC
SBS  Chr319921411G-AHomoINTERGENIC
SBS  Chr321657537T-CHomoNON_SYNONYMOUS_CODINGLOC_Os03g38970
SBS  Chr815322495A-GHomoNON_SYNONYMOUS_CODINGLOC_Os08g25220
SBS  Chr826711104G-AHomoNON_SYNONYMOUS_CODINGLOC_Os08g42310
SBS  Chr921559748T-CHomoINTRON

Deletions: 26

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr16837374683738814
Deletion  Chr10120120921201210816
Deletion  Chr112894000128965000250006
Deletion  Chr12727418572741905
Deletion  Chr122328637323286844471
Deletion  Chr210505653105056585LOC_Os02g18080
Deletion  Chr225723099257231045
Deletion  Chr2163575821635759210
Deletion  Chr312018148120181491
Deletion  Chr317706955177069627
Deletion  Chr4169798851697990217LOC_Os04g28660
Deletion  Chr418032151180321587LOC_Os04g30220
Deletion  Chr4238525552385259136LOC_Os04g40060
Deletion  Chr4273900139590001220000184
Deletion  Chr4322059283220594517
Deletion  Chr5297918772979189114LOC_Os05g51910
Deletion  Chr529170081291700854
Deletion  Chr57454774745479723
Deletion  Chr514124298141243002
Deletion  Chr7434595843459591
Deletion  Chr77126395712640611LOC_Os07g12490
Deletion  Chr7253855452538556621LOC_Os07g42410
Deletion  Chr8863512186351221
Deletion  Chr87518433751844512
Deletion  Chr8149268181492683012
Deletion  Chr99166945916695813

Insertions: 1

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr5528787352878731

Inversions: 1

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr111261290513638199

Translocations: 1

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr1227344060Chr11289392992