Mutant Information 

Mutant NameFN-121  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 33

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr113288697A-GHOMOINTERGENIC
SBS  Chr141888174A-CHETINTRON
SBS  Chr108228602T-GHETINTERGENIC
SBS  Chr1014080600C-THETINTRON
SBS  Chr1016841876C-AHETNON_SYNONYMOUS_CODINGLOC_Os10g32060
SBS  Chr1018668333C-GHETINTRON
SBS  Chr116248706C-AHETINTRON
SBS  Chr116248736G-AHETINTRON
SBS  Chr116871988T-CHOMOINTERGENIC
SBS  Chr116871995T-CHOMOINTERGENIC
SBS  Chr1118887432A-GHETINTRON
SBS  Chr1128934545C-THETNON_SYNONYMOUS_CODINGLOC_Os11g47970
SBS  Chr1128934546G-THETNON_SYNONYMOUS_CODINGLOC_Os11g47970
SBS  Chr1214391264G-AHOMOINTERGENIC
SBS  Chr1220810068C-THETINTRON
SBS  Chr229473295C-THOMOINTERGENIC
SBS  Chr230851755G-THETINTERGENIC
SBS  Chr21158391G-AHOMOINTERGENIC
SBS  Chr22686209T-AHETINTERGENIC
SBS  Chr26136942A-GHETINTRON
SBS  Chr232373333A-CHOMOINTRON
SBS  Chr27888475A-GHETNON_SYNONYMOUS_CODINGLOC_Os02g14370
SBS  Chr321426818C-THOMOINTERGENIC
SBS  Chr332111876G-AHETINTERGENIC
SBS  Chr37242617T-AHOMOINTERGENIC
SBS  Chr55443790A-THOMOINTRON
SBS  Chr521310048T-CHETINTERGENIC
SBS  Chr52165124A-GHOMOUTR_5_PRIME
SBS  Chr617681507A-THETSTOP_GAINEDLOC_Os06g30560
SBS  Chr628975124T-CHETINTERGENIC
SBS  Chr718054476T-CHETINTERGENIC
SBS  Chr816935086G-AHETNON_SYNONYMOUS_CODINGLOC_Os08g27800
SBS  Chr918873283G-AHOMONON_SYNONYMOUS_CODINGLOC_Os09g31390

Deletions: 24

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr1287771332877715017
Deletion  Chr17980001817700019700036
Deletion  Chr116917487169174925
Deletion  Chr109284922928493311
Deletion  Chr11811997481217021728LOC_Os11g14460
Deletion  Chr11687198168719821
Deletion  Chr229173512291735131LOC_Os02g47720
Deletion  Chr2240586824058779
Deletion  Chr39220134922014410
Deletion  Chr3327338953273391924
Deletion  Chr335358322353583253
Deletion  Chr326515712265157142
Deletion  Chr315144476151444771
Deletion  Chr316653261166532621
Deletion  Chr312094166120941671
Deletion  Chr4302443773025153571582
Deletion  Chr49428313942833825
Deletion  Chr518483798184837991
Deletion  Chr526545623265456252
Deletion  Chr529395001294870009200016
Deletion  Chr6236018623601948LOC_Os06g05240
Deletion  Chr722570266225702726
Deletion  Chr728566829285683691540LOC_Os07g47840
Deletion  Chr8268924592689249738LOC_Os08g42550

Insertions: 3

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr131696031316960311
Insertion  Chr25904855904851
Insertion  Chr620888479208884792

Inversions: 2

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr112876002328873909
Inversion  Chr31220805713129719LOC_Os03g22730