Mutant Information 

Mutant NameFN-125  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 23

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr11433895T-CHETINTRON
SBS  Chr1018512613G-AHETINTERGENIC
SBS  Chr115099667G-THETSYNONYMOUS_CODING
SBS  Chr1120938255T-AHOMOINTERGENIC
SBS  Chr1210915341G-AHETINTERGENIC
SBS  Chr1214072525G-CHETNON_SYNONYMOUS_CODINGLOC_Os12g24600
SBS  Chr1218270768G-AHETINTERGENIC
SBS  Chr1219534080A-THETINTRON
SBS  Chr1225408346G-AHETINTRON
SBS  Chr1226806715A-GHETINTERGENIC
SBS  Chr217065475A-THETINTERGENIC
SBS  Chr227547848G-AHOMOINTERGENIC
SBS  Chr323938999C-AHETINTERGENIC
SBS  Chr410267240G-AHETINTERGENIC
SBS  Chr43435206G-AHETINTERGENIC
SBS  Chr416239056G-THETINTERGENIC
SBS  Chr47453152G-AHETINTERGENIC
SBS  Chr516823315C-THOMOSYNONYMOUS_CODING
SBS  Chr58935951C-THETUTR_5_PRIME
SBS  Chr58935955T-CHETUTR_5_PRIME
SBS  Chr621588246G-THETINTERGENIC
SBS  Chr824580127C-THETINTERGENIC
SBS  Chr816199180C-THETINTERGENIC

Deletions: 22

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr130274523302745296
Deletion  Chr10190449221904494018LOC_Os10g35604
Deletion  Chr10189864311898650170
Deletion  Chr1126478700264787055
Deletion  Chr1225296338252963391
Deletion  Chr12198757851987581025
Deletion  Chr121793500117993000580004
Deletion  Chr22251432251441
Deletion  Chr227530405275304116
Deletion  Chr318801729188017312
Deletion  Chr427935758279357591
Deletion  Chr4299803229980408
Deletion  Chr5244618224461831
Deletion  Chr512242674122426795
Deletion  Chr510279871102798721LOC_Os05g17880
Deletion  Chr51715801017158217207LOC_Os05g29690
Deletion  Chr52142001215500013000LOC_Os05g04584
Deletion  Chr610433787104337903
Deletion  Chr6226658512266587120
Deletion  Chr726747089267540406951
Deletion  Chr818413508184135091
Deletion  Chr916239838162398391

Insertions: 2

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr1017559288175592881
Insertion  Chr214232906142329061

Inversions: 1

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr82450237424579765

Translocations: 7

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr1126385512Chr1014461385
Translocation  Chr1126391582Chr1014461384
Translocation  Chr328999991Chr212854827
Translocation  Chr329014394Chr212149645
Translocation  Chr630938519Chr52167166
Translocation  Chr630938566Chr52155166
Translocation  Chr334236267Chr23550161LOC_Os03g60190