Mutant Information 

Mutant NameFN-126  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 20

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr111111937T-AHOMOINTRON
SBS  Chr119716907T-CHOMONON_SYNONYMOUS_CODINGLOC_Os01g35630
SBS  Chr109204919A-GHETINTERGENIC
SBS  Chr114106216C-GHETINTRON
SBS  Chr233207266G-THOMOINTERGENIC
SBS  Chr315867705A-GHETINTERGENIC
SBS  Chr34414084T-CHOMOINTRON
SBS  Chr414676237A-THOMOINTRON
SBS  Chr625703355T-CHETINTERGENIC
SBS  Chr625703354T-CHETINTERGENIC
SBS  Chr620673434A-GHOMOUTR_3_PRIME
SBS  Chr66190756A-CHETINTERGENIC
SBS  Chr613822768T-AHETINTERGENIC
SBS  Chr714753552G-AHOMOINTERGENIC
SBS  Chr716430300T-CHOMOINTERGENIC
SBS  Chr713463032T-GHOMONON_SYNONYMOUS_CODINGLOC_Os07g23840
SBS  Chr813714586C-GHOMOINTERGENIC
SBS  Chr912413891A-THOMOINTERGENIC
SBS  Chr917473367G-AHOMOSTOP_GAINEDLOC_Os09g28760
SBS  Chr99710730C-THOMONON_SYNONYMOUS_CODINGLOC_Os09g15890

Deletions: 19

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr119716824197168284
Deletion  Chr1020400496204005059
Deletion  Chr1120091038200910413
Deletion  Chr11434467043446711
Deletion  Chr11151733961517340812
Deletion  Chr11153781421537815614
Deletion  Chr12740859374085941
Deletion  Chr12201904392019046728
Deletion  Chr233048030330480322
Deletion  Chr25156088515610012LOC_Os02g09930
Deletion  Chr310502318105023224LOC_Os03g18740
Deletion  Chr4109083641090837915
Deletion  Chr621962018219620191
Deletion  Chr6337648033764888
Deletion  Chr65842011584202615LOC_Os06g11140
Deletion  Chr610825622108924156679311
Deletion  Chr72220242822202603175
Deletion  Chr9152602411526025110
Deletion  Chr9208669812086699615

Insertions: 6

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr129200944292009441
Insertion  Chr1019725372197253721
Insertion  Chr312329455123294551
Insertion  Chr528124716281247162LOC_Os05g49040
Insertion  Chr529335655293356551
Insertion  Chr729563869295638694