Mutant Information 

Mutant NameFN-127  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 33

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr122793612T-AHETINTRON
SBS  Chr125242634G-AHETINTERGENIC
SBS  Chr130432103G-AHOMOINTERGENIC
SBS  Chr101293914A-THOMONON_SYNONYMOUS_CODINGLOC_Os10g03080
SBS  Chr107458702G-AHETINTRON
SBS  Chr109587541T-GHETINTRON
SBS  Chr1012547619G-AHOMOINTERGENIC
SBS  Chr1013393427G-AHETINTRON
SBS  Chr116457686C-AHETINTERGENIC
SBS  Chr119064583G-AHETINTERGENIC
SBS  Chr119064584G-AHETINTERGENIC
SBS  Chr1111564495T-AHOMOINTERGENIC
SBS  Chr1120838991T-GHETNON_SYNONYMOUS_CODINGLOC_Os11g35550
SBS  Chr1123082538A-THOMOINTERGENIC
SBS  Chr1214633079T-CHETINTRON
SBS  Chr21931248C-AHETNON_SYNONYMOUS_CODINGLOC_Os02g04380
SBS  Chr320551353A-THOMOINTERGENIC
SBS  Chr324931632T-CHOMOINTRON
SBS  Chr430984816C-THETINTERGENIC
SBS  Chr44515712T-CHOMOINTERGENIC
SBS  Chr43053521C-GHETNON_SYNONYMOUS_CODINGLOC_Os04g05900
SBS  Chr4634463A-GHETINTERGENIC
SBS  Chr413564858G-AHOMOINTERGENIC
SBS  Chr516597412G-AHOMOINTERGENIC
SBS  Chr57356709C-THETINTERGENIC
SBS  Chr51075323G-THOMOINTERGENIC
SBS  Chr625334967C-AHOMONON_SYNONYMOUS_CODINGLOC_Os06g42200
SBS  Chr624863246G-AHETINTERGENIC
SBS  Chr713354246G-AHETUTR_3_PRIME
SBS  Chr818340786A-CHETNON_SYNONYMOUS_CODINGLOC_Os08g29840
SBS  Chr88175586A-GHETINTERGENIC
SBS  Chr8670877C-THOMOINTERGENIC
SBS  Chr916905094A-THETINTERGENIC

Deletions: 22

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr135492889354928901LOC_Os01g61350
Deletion  Chr1351643535164361
Deletion  Chr10186060818606113LOC_Os10g04050
Deletion  Chr101293808129382517LOC_Os10g03080
Deletion  Chr114863031486304716
Deletion  Chr11251902825190335LOC_Os11g05556
Deletion  Chr121297934129796026
Deletion  Chr1223278625232786316
Deletion  Chr26287496287545LOC_Os02g02120
Deletion  Chr251074251075210LOC_Os02g01940
Deletion  Chr3804638280463875
Deletion  Chr430301876303018793
Deletion  Chr4333244343332444713
Deletion  Chr4339444263394444014
Deletion  Chr4346479134647976
Deletion  Chr4691380869138113
Deletion  Chr58234918234976LOC_Os05g02435
Deletion  Chr51095629110956971680
Deletion  Chr627158058271580591
Deletion  Chr87300847730085710
Deletion  Chr914432851144328521
Deletion  Chr9149106871491069912

Insertions: 3

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr1220570822057084
Insertion  Chr1111564497115644971
Insertion  Chr4416758041675802

Inversions: 2

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr11621834916483406LOC_Os01g28950
Inversion  Chr11621834916483406LOC_Os01g29409

Translocations: 4

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr510956300Chr235072216LOC_Os02g57240
Translocation  Chr510956957Chr235072214LOC_Os02g57240
Translocation  Chr723426155Chr133415922
Translocation  Chr723429347Chr133415882