Mutant Information 

Mutant NameFN-13  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 31

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr134432688G-AHETNON_SYNONYMOUS_CODINGLOC_Os01g59550
SBS  Chr1116214207G-AHOMOINTERGENIC
SBS  Chr1116214207G-AHomoINTERGENIC
SBS  Chr1221433094C-THETINTRON
SBS  Chr128181001A-GHETINTRON
SBS  Chr124229865A-GHETINTERGENIC
SBS  Chr332183256C-THOMOSYNONYMOUS_CODING
SBS  Chr332183255C-THomoNON_SYNONYMOUS_CODINGLOC_Os03g56470
SBS  Chr34216246T-CHomoINTERGENIC
SBS  Chr34216246T-CHOMOINTERGENIC
SBS  Chr332183255C-THOMONON_SYNONYMOUS_CODINGLOC_Os03g56470
SBS  Chr332183256C-THomoSYNONYMOUS_CODING
SBS  Chr41428248C-THOMOINTERGENIC
SBS  Chr41428248C-THomoINTERGENIC
SBS  Chr526553470G-AHOMOINTERGENIC
SBS  Chr527006277C-GHOMOINTRON
SBS  Chr527006277C-GHomoINTRON
SBS  Chr526553470G-AHomoINTERGENIC
SBS  Chr528117991C-THETINTERGENIC
SBS  Chr528227595C-AHETUTR_3_PRIME
SBS  Chr627600249T-CHomoINTERGENIC
SBS  Chr67905511T-CHETINTERGENIC
SBS  Chr627600249T-CHOMOINTERGENIC
SBS  Chr76889642G-AHETINTERGENIC
SBS  Chr77605918A-GHETINTERGENIC
SBS  Chr77537271A-GHETINTERGENIC
SBS  Chr810660800C-THETINTERGENIC
SBS  Chr8695114C-THETINTERGENIC
SBS  Chr93524227C-AHETINTERGENIC
SBS  Chr92223683A-GHETINTERGENIC
SBS  Chr93524223A-THETINTERGENIC

Deletions: 22

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr1279171202791713111
Deletion  Chr119336413193364141
Deletion  Chr10347837034783711
Deletion  Chr1018683254186832595LOC_Os10g35020
Deletion  Chr1113091414130914151
Deletion  Chr112068509206856657LOC_Os11g04860
Deletion  Chr230357939303579401
Deletion  Chr2175697431756975310
Deletion  Chr22639500126424000290006
Deletion  Chr2296024522960247018
Deletion  Chr3518053451805351
Deletion  Chr44987244987251
Deletion  Chr4240708632407088421LOC_Os04g40520
Deletion  Chr435102250351022588
Deletion  Chr411802533118025374
Deletion  Chr511620670116206788LOC_Os05g19920
Deletion  Chr61735796517358391426LOC_Os06g30110
Deletion  Chr729524416295244171LOC_Os07g49300
Deletion  Chr83664217366425841
Deletion  Chr89390835939087944
Deletion  Chr8497586649758759
Deletion  Chr9474188047418822

Insertions: 2

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr711697414116974142
Insertion  Chr918860673188606731

Inversions: 6

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr112201771922136667LOC_Os11g37280
Inversion  Chr112201773322136667LOC_Os11g37280
Inversion  Chr22608221326394424LOC_Os02g43280
Inversion  Chr22608221326394424LOC_Os02g43740
Inversion  Chr22608222726424143LOC_Os02g43280
Inversion  Chr368288489036485LOC_Os03g12760

Translocations: 3

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr1012883297Chr818114123LOC_Os08g29540
Translocation  Chr1012886575Chr8181141242
Translocation  Chr1120024974Chr74983063