Mutant Information 

Mutant NameFN-131  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 33

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr13393632G-AHOMOINTERGENIC
SBS  Chr127172907T-CHETINTRON
SBS  Chr1018612203T-AHOMOINTRON
SBS  Chr1012266152G-CHOMOINTERGENIC
SBS  Chr1113428275T-AHETINTRON
SBS  Chr115794098A-CHETINTERGENIC
SBS  Chr114524213A-THETINTRON
SBS  Chr1119627479C-THETINTERGENIC
SBS  Chr231486104G-AHOMOINTERGENIC
SBS  Chr231485102A-THOMOINTERGENIC
SBS  Chr24008622T-AHOMOINTERGENIC
SBS  Chr316395333G-THETINTERGENIC
SBS  Chr3487107C-THOMOINTERGENIC
SBS  Chr318761984G-AHETINTERGENIC
SBS  Chr410603754C-THETINTERGENIC
SBS  Chr428850552T-AHETINTRON
SBS  Chr424431819G-THETUTR_3_PRIME
SBS  Chr423493708C-THETINTRON
SBS  Chr417467806T-AHETINTERGENIC
SBS  Chr58893317T-CHETINTRON
SBS  Chr57999384G-AHETINTERGENIC
SBS  Chr519020844G-CHETINTERGENIC
SBS  Chr67585744G-AHOMOSYNONYMOUS_CODING
SBS  Chr630436203G-AHOMOINTRON
SBS  Chr67210285C-AHOMOINTRON
SBS  Chr720783800G-AHOMOINTRON
SBS  Chr7470834C-THETINTERGENIC
SBS  Chr82270085G-AHOMOSTOP_GAINEDLOC_Os08g04560
SBS  Chr811485261T-AHOMOINTERGENIC
SBS  Chr88216340T-AHETINTERGENIC
SBS  Chr87117293C-THETNON_SYNONYMOUS_CODINGLOC_Os08g12080
SBS  Chr83175854G-AHOMONON_SYNONYMOUS_CODINGLOC_Os08g05900
SBS  Chr82270355A-THOMONON_SYNONYMOUS_CODINGLOC_Os08g04560

Deletions: 22

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr10178623081786232214
Deletion  Chr10521659252165942
Deletion  Chr105332001548800015600021
Deletion  Chr11621534962153501
Deletion  Chr21770366817703909241
Deletion  Chr229371478293714824
Deletion  Chr2176947901769481121
Deletion  Chr35035445035451
Deletion  Chr3600753860075391
Deletion  Chr3345844463458446923
Deletion  Chr410649802106498031
Deletion  Chr424345793243457996
Deletion  Chr43445727834457387109LOC_Os04g57870
Deletion  Chr42800143000150003
Deletion  Chr55612505612522LOC_Os05g01970
Deletion  Chr57975542797557533
Deletion  Chr71052789105281324
Deletion  Chr7146491721464918917
Deletion  Chr776770017719000420007
Deletion  Chr823699105236991149
Deletion  Chr9458318845831913
Deletion  Chr913271099132711078

Insertions: 1

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr1290008929000891

Inversions: 5

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr22922473829425644LOC_Os02g47780
Inversion  Chr91091786211519040LOC_Os09g17840
Inversion  Chr91091787313899698LOC_Os09g17840
Inversion  Chr91151904914000853
Inversion  Chr91389969014000840

Translocations: 2

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr915196859Chr334306987
Translocation  Chr915197263Chr334306962