Mutant Information 

Mutant NameFN-135  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 17

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr19278869G-THOMOSYNONYMOUS_CODING
SBS  Chr19278870C-THOMONON_SYNONYMOUS_CODINGLOC_Os01g16354
SBS  Chr125608110C-THETINTERGENIC
SBS  Chr126439290G-AHETINTERGENIC
SBS  Chr103615752C-AHETINTERGENIC
SBS  Chr1128220644C-THOMOINTRON
SBS  Chr215457883C-THETINTERGENIC
SBS  Chr319644858A-THOMONON_SYNONYMOUS_CODINGLOC_Os03g35430
SBS  Chr31020052G-CHOMOUTR_3_PRIME
SBS  Chr431932053A-GHETINTERGENIC
SBS  Chr524874612C-THETINTERGENIC
SBS  Chr524481900A-GHETNON_SYNONYMOUS_CODINGLOC_Os05g41800
SBS  Chr521112759C-GHOMOINTRON
SBS  Chr510209678C-THETINTERGENIC
SBS  Chr66393855G-THOMOINTERGENIC
SBS  Chr812614895T-CHETSYNONYMOUS_CODING
SBS  Chr823336353T-CHETNON_SYNONYMOUS_CODINGLOC_Os08g36900

Deletions: 18

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr169190016933000140002
Deletion  Chr16424322642433412
Deletion  Chr1193012371930124811
Deletion  Chr10591150459115084
Deletion  Chr1111493210114932188
Deletion  Chr1110419695104196961
Deletion  Chr12162508916250945LOC_Os12g03920
Deletion  Chr2573475857347624
Deletion  Chr210737694107376951
Deletion  Chr521487202214872086
Deletion  Chr525451892254518931
Deletion  Chr6204130772041308811
Deletion  Chr613233568132335768
Deletion  Chr626059273260592763
Deletion  Chr726355679263556867
Deletion  Chr7466073946607434
Deletion  Chr71645100116483000320005
Deletion  Chr9201350220135119

Insertions: 1

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr434768945347689451

Translocations: 6

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr58400435Chr16932837LOC_Os01g12590
Translocation  Chr58400792Chr16919570
Translocation  Chr68968029Chr36374264
Translocation  Chr1215307504Chr827719363LOC_Os12g26260
Translocation  Chr1215307770Chr68968000LOC_Os12g26260
Translocation  Chr1215309524Chr69799693LOC_Os06g16900