Mutant Information 

Mutant NameFN-136  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 29

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr114133100T-GHOMONON_SYNONYMOUS_CODINGLOC_Os01g25060
SBS  Chr138395048G-THETINTERGENIC
SBS  Chr1015308224A-GHETINTRON
SBS  Chr1120237325T-AHETNON_SYNONYMOUS_CODINGLOC_Os11g34560
SBS  Chr1115118728C-THETINTERGENIC
SBS  Chr1115118727C-THETINTERGENIC
SBS  Chr1110074404C-THETINTERGENIC
SBS  Chr1110074400C-THETINTERGENIC
SBS  Chr1222220891G-AHETINTERGENIC
SBS  Chr2449257C-THETNON_SYNONYMOUS_CODINGLOC_Os02g01810
SBS  Chr227326682T-CHETINTERGENIC
SBS  Chr224025730G-AHETINTRON
SBS  Chr334741935A-CHOMOINTERGENIC
SBS  Chr311436719G-THETINTERGENIC
SBS  Chr432463737G-AHETINTERGENIC
SBS  Chr432463738T-AHETINTERGENIC
SBS  Chr516794786G-THETINTERGENIC
SBS  Chr59308182G-AHETINTERGENIC
SBS  Chr54645027A-CHETINTRON
SBS  Chr54143227A-CHETSYNONYMOUS_CODING
SBS  Chr52034097G-AHETNON_SYNONYMOUS_CODINGLOC_Os05g04420
SBS  Chr621125929G-AHOMOINTERGENIC
SBS  Chr729158586G-AHETSYNONYMOUS_CODING
SBS  Chr728825616A-THETINTERGENIC
SBS  Chr714356576C-AHETNON_SYNONYMOUS_CODINGLOC_Os07g25130
SBS  Chr81374240C-THETINTERGENIC
SBS  Chr826815958A-THOMOINTERGENIC
SBS  Chr912298494T-GHOMOINTERGENIC
SBS  Chr9892677A-GHOMOINTERGENIC

Deletions: 17

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr15741274574128410
Deletion  Chr1101674631016748421
Deletion  Chr19766052976606614
Deletion  Chr1134031241340313713
Deletion  Chr1022342933223429374
Deletion  Chr1010474672104746808LOC_Os10g20700
Deletion  Chr11127126631271267310
Deletion  Chr12176938641769387511
Deletion  Chr2405651440565151
Deletion  Chr231400123314001241
Deletion  Chr328104639281046434
Deletion  Chr421056412210564131
Deletion  Chr434089975340899761
Deletion  Chr528023346280233537
Deletion  Chr516788121167881254
Deletion  Chr614105728141057313LOC_Os06g24100
Deletion  Chr98926878926925

Insertions: 1

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr825824153258241532

Translocations: 2

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr113160269Chr433704598LOC_Os11g06570
Translocation  Chr113161506Chr433704597LOC_Os11g06570