Mutant Information 

Mutant NameFN-138  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 10

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr14698622A-GHETINTRON
SBS  Chr1020744448C-THETUTR_5_PRIME
SBS  Chr1011341426A-CHETINTERGENIC
SBS  Chr119807390T-CHETINTRON
SBS  Chr1116104142G-AHETINTERGENIC
SBS  Chr128981092C-GHOMOINTERGENIC
SBS  Chr27175709G-AHETNON_SYNONYMOUS_CODINGLOC_Os02g13430
SBS  Chr330424042A-THETSYNONYMOUS_CODING
SBS  Chr514085463G-AHOMOINTERGENIC
SBS  Chr78169153T-CHOMOINTERGENIC

Deletions: 12

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr120726137207261425
Deletion  Chr1037840013815000310003
Deletion  Chr1011731001118210009000013
Deletion  Chr1115628306156283093
Deletion  Chr1114375692143756931
Deletion  Chr1224264752242647597
Deletion  Chr21856600118581000150003
Deletion  Chr222202467222024714
Deletion  Chr336126163361261718LOC_Os03g63940
Deletion  Chr425686033256860341LOC_Os04g43410
Deletion  Chr433430385334303872
Deletion  Chr518387194183871951

Insertions: 1

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr625246934252469342

Inversions: 4

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr1025775972745320LOC_Os10g05540
Inversion  Chr21856542918737015LOC_Os02g31070
Inversion  Chr21857929218737033LOC_Os02g31080
Inversion  Chr889947378997330

Translocations: 4

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr8269949Chr2190380332
Translocation  Chr8273482Chr219961809LOC_Os08g01420
Translocation  Chr8273552Chr218863396LOC_Os08g01420
Translocation  Chr8396837Chr2190380252