Mutant Information 

Mutant NameFN-139  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 19

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr126686582G-AHETINTERGENIC
SBS  Chr128683614C-GHETINTERGENIC
SBS  Chr139305455C-GHETINTERGENIC
SBS  Chr113128420G-AHETINTRON
SBS  Chr124574699G-THETINTERGENIC
SBS  Chr128954890G-THETINTRON
SBS  Chr233910998A-THETINTERGENIC
SBS  Chr2919861C-THETINTRON
SBS  Chr224215015C-AHETINTERGENIC
SBS  Chr224215014G-AHETINTERGENIC
SBS  Chr33033643C-THETINTERGENIC
SBS  Chr511530447G-AHETNON_SYNONYMOUS_CODINGLOC_Os05g19764
SBS  Chr511530442T-CHETSYNONYMOUS_CODING
SBS  Chr623471549A-CHETUTR_3_PRIME
SBS  Chr623119935C-THETINTRON
SBS  Chr629659268G-THETINTRON
SBS  Chr713084502C-THETUTR_3_PRIME
SBS  Chr92913816G-AHETINTERGENIC
SBS  Chr913950232G-AHETINTERGENIC

Deletions: 14

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr139305448393054491
Deletion  Chr1010090447100917181271
Deletion  Chr10450274245027519LOC_Os10g08319
Deletion  Chr11454393645439426
Deletion  Chr232825441328254487
Deletion  Chr3258290082582901911
Deletion  Chr411347888113478891
Deletion  Chr420574010205740111
Deletion  Chr4654226165422665
Deletion  Chr4393911639391226LOC_Os04g07400
Deletion  Chr419947273199472796
Deletion  Chr8910767091076711
Deletion  Chr82771700127741000240004
Deletion  Chr915780058157800613

Insertions: 4

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr334263370342633701LOC_Os03g60240
Insertion  Chr5256768125676812
Insertion  Chr7329390332939031
Insertion  Chr920166224201662242

Inversions: 5

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr1142055134254967LOC_Os11g08110
Inversion  Chr111277817914009410LOC_Os11g24550
Inversion  Chr31373518822857632LOC_Os03g24180
Inversion  Chr31373518822857632LOC_Os03g41120
Inversion  Chr32285765223238765LOC_Os03g41120

Translocations: 4

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr1010091707Chr359569782
Translocation  Chr1212338380Chr595243122
Translocation  Chr1212338386Chr59529657LOC_Os12g21910
Translocation  Chr821174223Chr62350648LOC_Os08g33830