Mutant Information 

Mutant NameFN-14  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 15

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr1018749169A-THomoNON_SYNONYMOUS_CODINGLOC_Os10g35130
SBS  Chr104636749A-GHomoINTERGENIC
SBS  Chr115516697T-GHomoINTERGENIC
SBS  Chr1226806715A-GHETINTERGENIC
SBS  Chr1210915341G-AHomoINTERGENIC
SBS  Chr34260960C-THomoUTR_5_PRIME
SBS  Chr433511067G-AHomoINTERGENIC
SBS  Chr417377827G-CHomoNON_SYNONYMOUS_CODINGLOC_Os04g29310
SBS  Chr415965226G-AHomoINTERGENIC
SBS  Chr47420905C-THomoINTRON
SBS  Chr520451218G-AHomoINTERGENIC
SBS  Chr616966737G-AHomoINTERGENIC
SBS  Chr88452836C-GHomoINTERGENIC
SBS  Chr816761388T-CHomoINTRON
SBS  Chr88452685A-THomoINTERGENIC

Deletions: 17

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr1225830622583082
Deletion  Chr1114588991145889921
Deletion  Chr112210400122130000260003
Deletion  Chr2128632381286326426
Deletion  Chr326725857267258581
Deletion  Chr4458731745873247
Deletion  Chr5238514423851451LOC_Os05g04950
Deletion  Chr517711119177111278
Deletion  Chr5274900062749001610
Deletion  Chr617986071179860721
Deletion  Chr62127300121343000700004
Deletion  Chr7195163731951638310
Deletion  Chr810272027102720281
Deletion  Chr85175708517573022
Deletion  Chr9606993160699332
Deletion  Chr9175106711751068716
Deletion  Chr97472830747284818

Insertions: 1

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr519983280199832801

Inversions: 6

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr17612225753480LOC_Os01g01150
Inversion  Chr17612225753480LOC_Os01g45370
Inversion  Chr1237313374117919LOC_Os12g07510
Inversion  Chr1237313644117925LOC_Os12g07510
Inversion  Chr61976192121343148
Inversion  Chr62127282121429594LOC_Os06g36310