Mutant Information 

Mutant NameFN-141  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 27

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr116457638G-THETINTERGENIC
SBS  Chr116584544G-AHETSYNONYMOUS_CODING
SBS  Chr137355153A-THETINTRON
SBS  Chr1023063935G-AHOMOSYNONYMOUS_CODING
SBS  Chr1118427034C-THOMOSYNONYMOUS_CODING
SBS  Chr112101113G-CHOMOINTERGENIC
SBS  Chr129013707G-AHOMOINTERGENIC
SBS  Chr2294985A-THETINTERGENIC
SBS  Chr318048397G-THOMONON_SYNONYMOUS_CODINGLOC_Os03g31620
SBS  Chr336279668G-AHETINTERGENIC
SBS  Chr413578648A-THETNON_SYNONYMOUS_CODINGLOC_Os04g23739
SBS  Chr430125546G-THOMOINTERGENIC
SBS  Chr49537826C-THOMOSYNONYMOUS_CODING
SBS  Chr529886601T-AHOMOINTRON
SBS  Chr512281711C-AHOMOINTERGENIC
SBS  Chr55972681T-AHOMOINTRON
SBS  Chr55972695G-AHOMOINTRON
SBS  Chr510347914G-AHETINTERGENIC
SBS  Chr621709826G-AHOMOSYNONYMOUS_CODING
SBS  Chr621753753G-THOMOINTERGENIC
SBS  Chr621753754T-AHOMOINTERGENIC
SBS  Chr711210055C-THETINTERGENIC
SBS  Chr716466796G-AHETINTRON
SBS  Chr82596687C-THETINTERGENIC
SBS  Chr81303623A-THETINTRON
SBS  Chr82343447G-THETINTERGENIC
SBS  Chr97260586T-CHETINTERGENIC

Deletions: 17

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr127326148273261513LOC_Os01g47760
Deletion  Chr1266409726641047
Deletion  Chr1119069264190692662LOC_Os11g32270
Deletion  Chr2853669185366976
Deletion  Chr231726758317267591
Deletion  Chr2630759563076005LOC_Os02g12120
Deletion  Chr3161203081612032214
Deletion  Chr55813001596000014700016
Deletion  Chr61741021174103413LOC_Os06g04169
Deletion  Chr624281284242812851LOC_Os06g40730
Deletion  Chr62293958122956445168642
Deletion  Chr821999675219996805
Deletion  Chr85320438532045113
Deletion  Chr8545806854663518283LOC_Os08g09420
Deletion  Chr853210015346000250004
Deletion  Chr9659985866077537895
Deletion  Chr96393619659192919831031

Insertions: 2

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr11578131957813191
Insertion  Chr411057409110574091

Inversions: 3

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr42042046223257158
Inversion  Chr813029105346407LOC_Os08g02990
Inversion  Chr813029105346407LOC_Os08g09220