Mutant Information 

Mutant NameFN-142  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 34

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr12223140G-AHETINTERGENIC
SBS  Chr111929906G-CHETINTERGENIC
SBS  Chr122708561G-AHOMOINTERGENIC
SBS  Chr128681953C-THOMOINTERGENIC
SBS  Chr103809088T-AHETINTERGENIC
SBS  Chr118291868C-THETINTERGENIC
SBS  Chr1110265783C-GHETINTRON
SBS  Chr128626714C-THETNON_SYNONYMOUS_CODINGLOC_Os12g15120
SBS  Chr1214676904C-AHETINTERGENIC
SBS  Chr1216130772C-GHETINTRON
SBS  Chr1225558978G-AHETUTR_3_PRIME
SBS  Chr227076671A-GHETINTERGENIC
SBS  Chr217501427G-AHETINTRON
SBS  Chr334996628C-THETINTERGENIC
SBS  Chr334996627A-THETUTR_5_PRIME
SBS  Chr330163860G-AHETINTRON
SBS  Chr310228821C-AHETINTERGENIC
SBS  Chr4545004A-THOMOINTERGENIC
SBS  Chr424526899C-THETNON_SYNONYMOUS_CODINGLOC_Os04g41330
SBS  Chr424017693T-AHETINTERGENIC
SBS  Chr418724775C-THETINTERGENIC
SBS  Chr416269188G-CHOMONON_SYNONYMOUS_CODINGLOC_Os04g27520
SBS  Chr416110373C-AHETINTERGENIC
SBS  Chr52018313G-AHETINTERGENIC
SBS  Chr522032061A-GHOMOINTERGENIC
SBS  Chr614616789C-GHOMOUTR_5_PRIME
SBS  Chr615038282C-THOMOINTERGENIC
SBS  Chr729639996A-GHETINTERGENIC
SBS  Chr76960099A-GHETINTERGENIC
SBS  Chr96531282C-THETINTERGENIC
SBS  Chr919188999C-THETINTERGENIC
SBS  Chr917385025G-AHETNON_SYNONYMOUS_CODINGLOC_Os09g28570
SBS  Chr917385020T-CHETSYNONYMOUS_CODING
SBS  Chr96049250T-CHOMOUTR_5_PRIME

Deletions: 20

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr142100401421004054
Deletion  Chr1012665841126658421
Deletion  Chr1226084484260844851LOC_Os12g42044
Deletion  Chr2261676852616771328
Deletion  Chr3139318931393190512
Deletion  Chr33261000132632000220004
Deletion  Chr4203490252034904318
Deletion  Chr43130900131361000520007
Deletion  Chr43135602731356438411
Deletion  Chr417891709178917123
Deletion  Chr5336551033655122
Deletion  Chr528926059289260612
Deletion  Chr54922254922316
Deletion  Chr6103196051031961510
Deletion  Chr674618027462591789
Deletion  Chr6233212122332122513
Deletion  Chr7131444331314444411
Deletion  Chr81814024181403814
Deletion  Chr8323943332394352
Deletion  Chr924190012435000160004

Insertions: 3

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr1012481382124813821
Insertion  Chr1225900257259002572
Insertion  Chr4747131874713181

Inversions: 1

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr43130972931403326LOC_Os04g52630

Translocations: 2

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr431355992Chr330514572LOC_Os03g53190
Translocation  Chr431403329Chr330513438