Mutant Information 

Mutant NameFN-144  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 39

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr124690807G-AHOMOINTERGENIC
SBS  Chr138121089A-THETINTERGENIC
SBS  Chr135131959T-CHOMOINTRON
SBS  Chr134919998G-CHETINTERGENIC
SBS  Chr134700206G-AHETINTERGENIC
SBS  Chr124690808C-AHOMOINTERGENIC
SBS  Chr1019850627T-AHETINTERGENIC
SBS  Chr1020905829T-CHETINTERGENIC
SBS  Chr1123861834A-GHETINTERGENIC
SBS  Chr1118390261C-THETUTR_3_PRIME
SBS  Chr1117375797C-AHETINTERGENIC
SBS  Chr126742291T-CHETINTERGENIC
SBS  Chr1224688905A-THETINTRON
SBS  Chr1226628309G-AHOMOINTERGENIC
SBS  Chr26579241T-CHETINTRON
SBS  Chr27228280A-GHETINTERGENIC
SBS  Chr219637963T-AHETINTRON
SBS  Chr328765579A-THETINTERGENIC
SBS  Chr332893619G-CHOMOINTERGENIC
SBS  Chr47719000C-THETSYNONYMOUS_CODING
SBS  Chr43126619G-CHETNON_SYNONYMOUS_CODINGLOC_Os04g06030
SBS  Chr46097393C-THETINTRON
SBS  Chr427255574T-AHETINTERGENIC
SBS  Chr48481018T-CHETINTERGENIC
SBS  Chr413819503A-THETINTRON
SBS  Chr413819504C-THETINTRON
SBS  Chr414547660G-AHETINTERGENIC
SBS  Chr47038196A-GHETINTRON
SBS  Chr53579783C-THOMOINTERGENIC
SBS  Chr630889907T-AHOMOINTERGENIC
SBS  Chr724716780G-AHETINTERGENIC
SBS  Chr714811037T-CHETINTRON
SBS  Chr725552703G-AHETINTERGENIC
SBS  Chr810338465T-CHETINTERGENIC
SBS  Chr917759055T-AHETINTRON
SBS  Chr916391425T-CHETINTERGENIC
SBS  Chr914739303G-AHETINTRON
SBS  Chr99117637G-THETINTERGENIC
SBS  Chr94107808C-GHOMOINTERGENIC

Deletions: 17

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr15196550519657323LOC_Os01g09980
Deletion  Chr15389519538953819
Deletion  Chr140463832404638331
Deletion  Chr115424706154247071
Deletion  Chr101393428213934397115LOC_Os10g26680
Deletion  Chr1120707357207084021045
Deletion  Chr11520589752058981
Deletion  Chr1114309180143091877
Deletion  Chr12936717293671764
Deletion  Chr331733598317336013
Deletion  Chr526437373264373774
Deletion  Chr6927581592758216LOC_Os06g16280
Deletion  Chr7553785655378615
Deletion  Chr723930088239300946
Deletion  Chr8222983262229837852
Deletion  Chr8254578492545786011
Deletion  Chr9203327802033279717

Insertions: 5

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr10928439392843931
Insertion  Chr235638525356385254
Insertion  Chr628897523288975231
Insertion  Chr815615026156150262
Insertion  Chr822865527228655271

Inversions: 1

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr112144200522638961

Translocations: 4

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr915387185Chr229394692LOC_Os09g25620
Translocation  Chr915388312Chr3545712
Translocation  Chr1121355675Chr810356753LOC_Os08g16910
Translocation  Chr1121442016Chr810327154LOC_Os08g16870