Mutant Information 

Mutant NameFN-149  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 29

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr12107632G-AHETSYNONYMOUS_CODING
SBS  Chr13887778T-CHETINTRON
SBS  Chr15686503G-THETINTERGENIC
SBS  Chr17722852A-GHETINTERGENIC
SBS  Chr129749815A-THOMOINTERGENIC
SBS  Chr1014089602A-GHETINTERGENIC
SBS  Chr1015101096C-GHOMOSYNONYMOUS_CODING
SBS  Chr117785196G-AHOMOINTERGENIC
SBS  Chr117785197A-GHOMOINTERGENIC
SBS  Chr119394917G-AHOMOINTERGENIC
SBS  Chr1115361561C-GHETINTERGENIC
SBS  Chr1120050670G-AHOMOINTERGENIC
SBS  Chr124668678C-THETNON_SYNONYMOUS_CODINGLOC_Os12g08940
SBS  Chr1227524481A-THOMOINTERGENIC
SBS  Chr315695146C-THETINTERGENIC
SBS  Chr319826674T-AHETINTERGENIC
SBS  Chr325474782T-CHETINTERGENIC
SBS  Chr413940734G-AHETINTERGENIC
SBS  Chr419663786G-AHOMOINTERGENIC
SBS  Chr427355349C-THETNON_SYNONYMOUS_CODINGLOC_Os04g46180
SBS  Chr58670060C-THOMONON_SYNONYMOUS_CODINGLOC_Os05g15290
SBS  Chr516629385A-THOMOINTERGENIC
SBS  Chr612556918T-CHETINTERGENIC
SBS  Chr616917794T-AHETINTERGENIC
SBS  Chr616658555C-AHETNON_SYNONYMOUS_CODINGLOC_Os06g29190
SBS  Chr74280835A-GHETINTERGENIC
SBS  Chr822309031T-AHETINTERGENIC
SBS  Chr85194750G-AHOMOINTERGENIC
SBS  Chr95271313C-THETINTERGENIC

Deletions: 16

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr1012185639121856401
Deletion  Chr10190738831907389714
Deletion  Chr11250750012565600058100084
Deletion  Chr11246520012505100039900054
Deletion  Chr232372040323720411
Deletion  Chr223125595231255994
Deletion  Chr223515528235155335LOC_Os02g38900
Deletion  Chr4326817173268173619
Deletion  Chr429049873290498796
Deletion  Chr417702742177027475
Deletion  Chr427355427273554347LOC_Os04g46180
Deletion  Chr7666134966613589
Deletion  Chr916715269167152767
Deletion  Chr921168978211689791
Deletion  Chr9222873342228735117LOC_Os09g38790
Deletion  Chr944850014508000230002

Insertions: 2

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr10258570225857023
Insertion  Chr5861064886106483

Inversions: 3

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr51045195711349782LOC_Os05g19530
Inversion  Chr830820453630910LOC_Os08g05750
Inversion  Chr942979004508492LOC_Os09g08310

Translocations: 4

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr83595884Chr31556650LOC_Os03g03560
Translocation  Chr83630897Chr31556664LOC_Os03g03560
Translocation  Chr510448337Chr45058852LOC_Os05g18180
Translocation  Chr511349776Chr449332022