Mutant Information 

Mutant NameFN-15  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 11

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr113511670T-AHomoINTERGENIC
SBS  Chr120605987T-CHomoINTERGENIC
SBS  Chr1010473553A-THomoINTERGENIC
SBS  Chr218388203G-AHomoNON_SYNONYMOUS_CODINGLOC_Os02g30840
SBS  Chr211378415C-THomoNON_SYNONYMOUS_CODINGLOC_Os02g19470
SBS  Chr41862129A-THomoINTRON
SBS  Chr524234609T-CHomoUTR_3_PRIME
SBS  Chr512797453C-THomoINTERGENIC
SBS  Chr710065284C-GHomoNON_SYNONYMOUS_CODINGLOC_Os07g17130
SBS  Chr916199623C-GHomoINTERGENIC
SBS  Chr916250459C-THomoINTERGENIC

Deletions: 14

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr1010284108102841091
Deletion  Chr122901001323100033000064
Deletion  Chr12277941827794191
Deletion  Chr2270916642709167410
Deletion  Chr2292720442927207228
Deletion  Chr3337387983373882123LOC_Os03g59250
Deletion  Chr33108259831140061574637
Deletion  Chr424365173243651763
Deletion  Chr5210320742103209016
Deletion  Chr53619896361998892
Deletion  Chr51318437113185111740
Deletion  Chr617837732178377331
Deletion  Chr84566064566104LOC_Os08g01750
Deletion  Chr9225160512251606110LOC_Os09g39200

Insertions: 3

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr233662626336626261
Insertion  Chr728354245283542452
Insertion  Chr911831239118312391

Inversions: 2

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr23209151232290205LOC_Os02g52810
Inversion  Chr33411975534509129LOC_Os03g60720