Mutant Information 

Mutant NameFN-154  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 29

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr117241204T-GHETINTERGENIC
SBS  Chr1014953889C-THETINTERGENIC
SBS  Chr103071012T-GHETINTERGENIC
SBS  Chr1215613360A-GHOMOSYNONYMOUS_CODING
SBS  Chr216312423C-THOMOSYNONYMOUS_CODING
SBS  Chr322329378T-CHOMOINTERGENIC
SBS  Chr32101818T-GHETUTR_3_PRIME
SBS  Chr48054483G-AHETSYNONYMOUS_CODING
SBS  Chr52168071T-CHOMOINTERGENIC
SBS  Chr511900675T-CHOMOINTERGENIC
SBS  Chr629649664A-GHETINTERGENIC
SBS  Chr621571749C-THETINTERGENIC
SBS  Chr613509665T-GHETINTERGENIC
SBS  Chr67928028C-THETINTERGENIC
SBS  Chr6733556G-AHOMOINTERGENIC
SBS  Chr720922025A-GHETINTERGENIC
SBS  Chr720354895T-CHETINTERGENIC
SBS  Chr720186579G-AHETSTOP_GAINEDLOC_Os07g33760
SBS  Chr77844806C-THOMOINTERGENIC
SBS  Chr710965631G-AHOMOINTRON
SBS  Chr720044810C-AHETINTERGENIC
SBS  Chr89640254G-AHETINTERGENIC
SBS  Chr82806744A-CHETINTERGENIC
SBS  Chr97301809T-GHETINTERGENIC
SBS  Chr916010608C-THETSYNONYMOUS_CODING
SBS  Chr97010494A-THETINTERGENIC
SBS  Chr919712124G-CHETNON_SYNONYMOUS_CODINGLOC_Os09g33460
SBS  Chr920456306A-CHETINTERGENIC
SBS  Chr919712123A-CHETNON_SYNONYMOUS_CODINGLOC_Os09g33460

Deletions: 16

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr1219226100192261077
Deletion  Chr12208278072082782922
Deletion  Chr121576001168900011300015
Deletion  Chr212447295124473038LOC_Os02g21009
Deletion  Chr229579112295791186
Deletion  Chr232625316326253182
Deletion  Chr3195620519562061
Deletion  Chr311145053111450563
Deletion  Chr4114140821141410422
Deletion  Chr4348371803483719010LOC_Os04g58590
Deletion  Chr4567172256717231
Deletion  Chr5477255547725572
Deletion  Chr6475783447578406
Deletion  Chr720044813200448141
Deletion  Chr723528220235282255
Deletion  Chr9180000011810100010100018

Inversions: 4

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr12850908329152427
Inversion  Chr101389751314058101LOC_Os10g26630
Inversion  Chr81000379512089165LOC_Os08g20170
Inversion  Chr91769134518100783

Translocations: 1

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr223219832Chr118423886LOC_Os02g38392