Mutant Information 

Mutant NameFN-157  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 31

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr125318253C-THETINTRON
SBS  Chr125318255C-THETINTRON
SBS  Chr134141808G-THETUTR_5_PRIME
SBS  Chr106965086G-CHETINTERGENIC
SBS  Chr106965090G-AHETINTERGENIC
SBS  Chr1013044151A-THETINTRON
SBS  Chr1016498345C-THETNON_SYNONYMOUS_CODINGLOC_Os10g31490
SBS  Chr111627335G-CHOMOINTRON
SBS  Chr1111164030C-THETNON_SYNONYMOUS_CODINGLOC_Os11g19420
SBS  Chr1116694098G-THETINTERGENIC
SBS  Chr1121457728T-CHETINTERGENIC
SBS  Chr1219320037G-THETINTRON
SBS  Chr24690683C-THETNON_SYNONYMOUS_CODINGLOC_Os02g09140
SBS  Chr24690684C-THETSYNONYMOUS_CODING
SBS  Chr231384295G-AHOMOINTERGENIC
SBS  Chr35395008T-AHOMOINTRON
SBS  Chr328576706C-THETNON_SYNONYMOUS_CODINGLOC_Os03g50100
SBS  Chr325522233T-CHOMOINTRON
SBS  Chr316291197C-AHOMOINTERGENIC
SBS  Chr416937919A-GHETINTERGENIC
SBS  Chr416937916C-THETINTERGENIC
SBS  Chr47155182G-AHETSYNONYMOUS_CODING
SBS  Chr515700812T-CHETINTRON
SBS  Chr54928346G-THETINTERGENIC
SBS  Chr54928345A-CHETINTERGENIC
SBS  Chr624628773T-AHETINTERGENIC
SBS  Chr613009101G-THOMOINTERGENIC
SBS  Chr613009090G-THOMOINTERGENIC
SBS  Chr613009089C-THOMOINTERGENIC
SBS  Chr76568296A-THETINTERGENIC
SBS  Chr822811119C-THOMOINTRON

Deletions: 39

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr113703565137035661
Deletion  Chr1773645777380441587
Deletion  Chr1609198760919881
Deletion  Chr104488934450281113877LOC_Os10g08319
Deletion  Chr111942455619468842442867
Deletion  Chr1117969977179699836
Deletion  Chr11165266161652663620
Deletion  Chr1119141758191456063848LOC_Os11g32420
Deletion  Chr11117977771179782144
Deletion  Chr1218334340183343411
Deletion  Chr12339326733932692
Deletion  Chr1219367047193670492
Deletion  Chr2356643735664447
Deletion  Chr26070149607016112LOC_Os02g11760
Deletion  Chr2297392212973925635
Deletion  Chr3277190422771905210
Deletion  Chr480816488091967103192
Deletion  Chr424329934243299351
Deletion  Chr430376002303760031
Deletion  Chr4252471292524714314
Deletion  Chr5246655024665511
Deletion  Chr526723302267233075
Deletion  Chr5535545053554533
Deletion  Chr54727159472717314
Deletion  Chr5288340712883408514
Deletion  Chr527469835274698383LOC_Os05g47920
Deletion  Chr515378315380421
Deletion  Chr6130091191300918061
Deletion  Chr6182797818279813
Deletion  Chr6564153156415343LOC_Os06g10810
Deletion  Chr7655811465665908476LOC_Os07g11860
Deletion  Chr89486017991043442441761
Deletion  Chr810307829103078312
Deletion  Chr8352145535214594
Deletion  Chr8464614746461492
Deletion  Chr8245701732457019320
Deletion  Chr921483539214835412
Deletion  Chr920958074209580784
Deletion  Chr9713653571365372

Insertions: 32

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr1274356427435643
Insertion  Chr1310592431059243
Insertion  Chr1491529349152932
Insertion  Chr14926434492643422
Insertion  Chr1536928153692812
Insertion  Chr1667473766747376
Insertion  Chr111739696117396964
Insertion  Chr121011469210114694
Insertion  Chr10174209317420934
Insertion  Chr118715538715532
Insertion  Chr11371038837103882
Insertion  Chr1112653359126533592
Insertion  Chr1122840117228401172
Insertion  Chr1126216523262165232
Insertion  Chr1128824595288245952
Insertion  Chr1128964957289649572LOC_Os11g48040
Insertion  Chr12957625095762501LOC_Os12g16710
Insertion  Chr1210248205102482054
Insertion  Chr1226180459261804591
Insertion  Chr2407074740707471
Insertion  Chr224075758240757581
Insertion  Chr425220774252207741
Insertion  Chr518819294188192941
Insertion  Chr624037839240378394
Insertion  Chr6274132932741329316LOC_Os06g45350
Insertion  Chr71186731118673110
Insertion  Chr7412457341245732
Insertion  Chr7648520064852001
Insertion  Chr710920496109204962
Insertion  Chr810779950107799501
Insertion  Chr814982004149820041
Insertion  Chr917213099172130992

Inversions: 2

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr51861965419843193LOC_Os05g33710
Inversion  Chr766970816722562

Translocations: 5

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr512022986Chr17736480LOC_Os05g20480
Translocation  Chr517327805Chr48081676LOC_Os04g14430
Translocation  Chr519843191Chr48091816LOC_Os05g33710
Translocation  Chr529261247Chr48339468LOC_Os05g50990
Translocation  Chr529261279Chr48328587LOC_Os05g50990