Mutant Information 

Mutant NameFN-159  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 29

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr11734143T-CHETUTR_3_PRIME
SBS  Chr19527006G-AHETINTERGENIC
SBS  Chr112515607C-GHETINTRON
SBS  Chr113853072G-AHETINTERGENIC
SBS  Chr120918464A-GHETINTERGENIC
SBS  Chr131326927T-AHETINTERGENIC
SBS  Chr113155535C-THETINTERGENIC
SBS  Chr119797206C-THETINTRON
SBS  Chr1112749513G-AHETNON_SYNONYMOUS_CODINGLOC_Os11g22220
SBS  Chr1113014394C-GHETINTRON
SBS  Chr1113877484G-AHETINTERGENIC
SBS  Chr1222902207C-GHETINTERGENIC
SBS  Chr217071746G-THOMOINTERGENIC
SBS  Chr323534818A-THETINTRON
SBS  Chr333841823G-AHOMOINTERGENIC
SBS  Chr333841825T-AHOMOINTERGENIC
SBS  Chr423381239G-AHOMOINTERGENIC
SBS  Chr418067191T-CHETINTERGENIC
SBS  Chr412131632A-THETINTERGENIC
SBS  Chr55154448C-AHOMOINTRON
SBS  Chr519113351C-THETINTERGENIC
SBS  Chr54100878G-CHETINTERGENIC
SBS  Chr610859252G-AHETINTERGENIC
SBS  Chr717024774C-THOMOINTRON
SBS  Chr77300003A-THETINTERGENIC
SBS  Chr85247044G-THETINTERGENIC
SBS  Chr817598255G-AHOMOSYNONYMOUS_CODING
SBS  Chr821436450C-THOMONON_SYNONYMOUS_CODINGLOC_Os08g34190
SBS  Chr86545820G-THOMOINTERGENIC

Deletions: 16

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr132786500327865077
Deletion  Chr1800124700023900051
Deletion  Chr1118233774182337762
Deletion  Chr1224670256246702604
Deletion  Chr226127121261271254LOC_Os02g43314
Deletion  Chr31421487142149912
Deletion  Chr31022243910222881442
Deletion  Chr374706907471360670
Deletion  Chr4561662256166253
Deletion  Chr519539819195398201
Deletion  Chr5939019293901986
Deletion  Chr51996962199698018
Deletion  Chr623518659235186678
Deletion  Chr6415348541534861
Deletion  Chr9389241938924278
Deletion  Chr9154546015491653705LOC_Os09g03210

Insertions: 2

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr114702304147023041
Insertion  Chr216468454164684544LOC_Os02g27810

Translocations: 1

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr310222864Chr224899825LOC_Os02g41520