Mutant Information 

Mutant NameFN-163  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 33

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr15272553G-AHETINTRON
SBS  Chr129491675T-CHETINTRON
SBS  Chr132960425A-THETINTRON
SBS  Chr104931503T-AHETINTERGENIC
SBS  Chr106862600C-THETINTRON
SBS  Chr107337190C-AHETNON_SYNONYMOUS_CODINGLOC_Os10g13550
SBS  Chr107535167C-THETINTERGENIC
SBS  Chr108539512A-GHETINTERGENIC
SBS  Chr109583892T-GHETINTRON
SBS  Chr118460261G-CHOMOINTERGENIC
SBS  Chr1116039070C-THETINTERGENIC
SBS  Chr1121033352G-THETSTOP_GAINEDLOC_Os11g35840
SBS  Chr128211596C-GHETINTRON
SBS  Chr2294985A-THOMOINTERGENIC
SBS  Chr319818810C-THETINTERGENIC
SBS  Chr323144673C-THETNON_SYNONYMOUS_CODINGLOC_Os03g41624
SBS  Chr428057266A-THETINTERGENIC
SBS  Chr423338071G-THETINTERGENIC
SBS  Chr418488780C-AHOMOINTERGENIC
SBS  Chr417640103G-CHETINTERGENIC
SBS  Chr41787471C-THETINTERGENIC
SBS  Chr529886601T-AHOMOINTRON
SBS  Chr528069496T-CHETINTERGENIC
SBS  Chr615559218G-AHETINTRON
SBS  Chr75598667A-CHOMOUTR_5_PRIME
SBS  Chr72315008C-THETSYNONYMOUS_CODING
SBS  Chr72315007A-THETNON_SYNONYMOUS_CODINGLOC_Os07g05190
SBS  Chr75490354C-THOMOINTERGENIC
SBS  Chr821841522A-GHETINTERGENIC
SBS  Chr821704903T-AHETINTERGENIC
SBS  Chr812569687G-AHOMOINTERGENIC
SBS  Chr82596687C-THOMOINTERGENIC
SBS  Chr99780718A-GHOMOINTERGENIC

Deletions: 12

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr1355891935589201
Deletion  Chr123206527232065281
Deletion  Chr10166357816635846
Deletion  Chr1119069264190692662LOC_Os11g32270
Deletion  Chr1219200845192008461
Deletion  Chr2132814113281476LOC_Os02g03280
Deletion  Chr330783563307835641
Deletion  Chr3238882932388835057
Deletion  Chr318749006187490082LOC_Os03g32730
Deletion  Chr3171410011729300015200027
Deletion  Chr728085934280859351
Deletion  Chr9984876598487661

Insertions: 4

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr219592499195924991
Insertion  Chr326744706267447061
Insertion  Chr524432561244325611
Insertion  Chr525234605252346054

Inversions: 10

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr11125463811264981LOC_Os01g19850
Inversion  Chr11125463811264981LOC_Os01g19860
Inversion  Chr11125466811264999LOC_Os01g19850
Inversion  Chr11125466811264999LOC_Os01g19860
Inversion  Chr32464839926400276LOC_Os03g46650
Inversion  Chr31729300417293655LOC_Os03g30300
Inversion  Chr31722837526400276LOC_Os03g46650
Inversion  Chr31722837526400276LOC_Os03g30190
Inversion  Chr31714066117293661
Inversion  Chr770241617027073

Translocations: 1

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr527428236Chr213135709LOC_Os02g22080