Mutant Information 

Mutant NameFN-165  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 20

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr119706591T-CHETINTERGENIC
SBS  Chr1124419663G-THOMOINTERGENIC
SBS  Chr1118480417T-CHETINTERGENIC
SBS  Chr127556950C-AHETINTERGENIC
SBS  Chr1226788634G-AHETINTERGENIC
SBS  Chr234896432A-GHETINTERGENIC
SBS  Chr235212696T-AHOMOINTERGENIC
SBS  Chr329228643A-GHOMOINTERGENIC
SBS  Chr311114917T-AHETINTRON
SBS  Chr412771900C-THOMOINTERGENIC
SBS  Chr417676636G-AHOMOINTERGENIC
SBS  Chr428517719G-CHETINTERGENIC
SBS  Chr430923720T-AHETNON_SYNONYMOUS_CODINGLOC_Os04g52060
SBS  Chr430923721T-AHETNON_SYNONYMOUS_CODINGLOC_Os04g52060
SBS  Chr64673354A-THETINTRON
SBS  Chr67660355C-THETINTERGENIC
SBS  Chr710635929C-AHETINTERGENIC
SBS  Chr816362610C-THETINTERGENIC
SBS  Chr84923703C-THETINTRON
SBS  Chr92742586C-GHETSYNONYMOUS_CODING

Deletions: 13

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr128676145286761461LOC_Os01g49930
Deletion  Chr1013365347133653481
Deletion  Chr10963336796333747LOC_Os10g18920
Deletion  Chr2869124186912432
Deletion  Chr228757600287576066
Deletion  Chr2480427548042761LOC_Os02g09340
Deletion  Chr323391698233916991
Deletion  Chr4245806992458071112
Deletion  Chr5336999233699931
Deletion  Chr611173153111731541
Deletion  Chr611319133113191341
Deletion  Chr922829426228294359LOC_Os09g39820
Deletion  Chr9980735798073592

Insertions: 5

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr1525492252549221
Insertion  Chr111884277118842772
Insertion  Chr1023022548230225481
Insertion  Chr823611468236114682
Insertion  Chr915131179151311794

Inversions: 1

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr42490924125623933

Translocations: 2

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr1213045632Chr523156678
Translocation  Chr1213045652Chr523154560LOC_Os05g39470