Mutant Information 

Mutant NameFN-172  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 28

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr18815830G-AHETINTERGENIC
SBS  Chr18815831A-THETINTERGENIC
SBS  Chr121482642C-THOMOINTERGENIC
SBS  Chr134602708G-AHOMOINTERGENIC
SBS  Chr1016607758C-AHETINTERGENIC
SBS  Chr1021204933T-CHETINTERGENIC
SBS  Chr1120724855C-THETINTERGENIC
SBS  Chr1120724856G-THETINTERGENIC
SBS  Chr128545260A-GHETINTERGENIC
SBS  Chr1213452891C-THOMOINTERGENIC
SBS  Chr223958099C-GHETINTERGENIC
SBS  Chr334352986G-AHOMOINTERGENIC
SBS  Chr45201340C-AHETINTRON
SBS  Chr45201341C-THETINTRON
SBS  Chr429361092T-AHETINTERGENIC
SBS  Chr617184497T-AHETINTERGENIC
SBS  Chr617652576T-AHETINTERGENIC
SBS  Chr627956423T-CHETINTERGENIC
SBS  Chr612672722C-THETINTERGENIC
SBS  Chr710923291T-GHETINTRON
SBS  Chr726924359T-AHETINTERGENIC
SBS  Chr718765005T-CHETINTERGENIC
SBS  Chr78437178G-THETSYNONYMOUS_CODING
SBS  Chr89526908A-GHETINTRON
SBS  Chr88954884A-GHETINTERGENIC
SBS  Chr823941551G-AHETINTERGENIC
SBS  Chr911209303A-THETINTRON
SBS  Chr913805119C-GHOMOINTRON

Deletions: 21

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr135028744350287451
Deletion  Chr1322201153222013217
Deletion  Chr10127379421273795816LOC_Os10g24770
Deletion  Chr11181666241816668460
Deletion  Chr1219667968196679702
Deletion  Chr23056693056701
Deletion  Chr2329163693291638516LOC_Os02g53750
Deletion  Chr2775779077577988
Deletion  Chr31283887128390619
Deletion  Chr3210078302100784212
Deletion  Chr428344668283446735
Deletion  Chr4172739517274027
Deletion  Chr4314936653149367914LOC_Os04g52880
Deletion  Chr526784223267842318
Deletion  Chr528297593282975941
Deletion  Chr6725223672522371
Deletion  Chr6205089652050898520
Deletion  Chr6199211351992115722
Deletion  Chr783451448345345201
Deletion  Chr8897139789713981
Deletion  Chr9271173727117381

Insertions: 5

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr412132205121322051
Insertion  Chr6523212452321241
Insertion  Chr617154267171542671
Insertion  Chr718898804188988041
Insertion  Chr824124414241244142