Mutant Information 

Mutant NameFN-177  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 19

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr11817219A-GHETINTRON
SBS  Chr16835820G-THETINTERGENIC
SBS  Chr1020960731C-THETINTERGENIC
SBS  Chr1019289658C-AHOMOINTERGENIC
SBS  Chr1127124282C-THETINTERGENIC
SBS  Chr1112991075G-AHETINTRON
SBS  Chr1220952341T-AHOMOINTERGENIC
SBS  Chr312853043A-THETINTERGENIC
SBS  Chr432768385G-AHETINTERGENIC
SBS  Chr417026A-THETINTERGENIC
SBS  Chr41031459G-AHETNON_SYNONYMOUS_CODINGLOC_Os04g02700
SBS  Chr427592061G-AHOMOINTERGENIC
SBS  Chr5196740A-GHETINTRON
SBS  Chr512938607T-GHETINTERGENIC
SBS  Chr629003482A-GHETUTR_5_PRIME
SBS  Chr726959170A-THOMOINTRON
SBS  Chr89884691C-THETSYNONYMOUS_CODING
SBS  Chr8835779C-AHOMOINTERGENIC
SBS  Chr98540362C-THETNON_SYNONYMOUS_CODINGLOC_Os09g14450

Deletions: 11

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr1019293555192935572
Deletion  Chr2114856601148568727
Deletion  Chr310063820100638255
Deletion  Chr3166407441664076319
Deletion  Chr53684294368430915
Deletion  Chr63594263594293
Deletion  Chr613521722135217231LOC_Os06g23160
Deletion  Chr729538767295387747LOC_Os07g49320
Deletion  Chr726086668260866768
Deletion  Chr820558560205585611
Deletion  Chr88978087897809710

Insertions: 5

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr1220570822057084
Insertion  Chr1217485054174850544
Insertion  Chr410339071103390711
Insertion  Chr623543748235437483
Insertion  Chr820060639200606396

Translocations: 1

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr51954744Chr421324005LOC_Os04g35080