Mutant Information 

Mutant NameFN-178  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 28

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr15545723A-GHOMOINTERGENIC
SBS  Chr110158815A-GHOMOINTERGENIC
SBS  Chr133864861G-AHETINTERGENIC
SBS  Chr1019885903G-THETNON_SYNONYMOUS_CODINGLOC_Os10g37170
SBS  Chr1128616561G-AHETINTERGENIC
SBS  Chr1115959786G-CHETINTRON
SBS  Chr1112998495C-AHETINTRON
SBS  Chr128637328G-CHETINTRON
SBS  Chr29946459T-GHETINTERGENIC
SBS  Chr21003262C-THETINTERGENIC
SBS  Chr318105316G-AHETINTERGENIC
SBS  Chr314201258C-THETINTERGENIC
SBS  Chr322641974C-THOMONON_SYNONYMOUS_CODINGLOC_Os03g40720
SBS  Chr415982360A-THETINTERGENIC
SBS  Chr515455260G-THETNON_SYNONYMOUS_CODINGLOC_Os05g26600
SBS  Chr513943547T-AHETINTRON
SBS  Chr5189923G-THETSYNONYMOUS_CODING
SBS  Chr628543139C-THOMOINTERGENIC
SBS  Chr616089461A-GHETINTERGENIC
SBS  Chr617785150A-THETINTERGENIC
SBS  Chr77804923C-THETINTERGENIC
SBS  Chr77209870G-THOMOINTERGENIC
SBS  Chr82442659C-AHOMOINTERGENIC
SBS  Chr818628366G-AHETSYNONYMOUS_CODING
SBS  Chr816808461G-THETINTRON
SBS  Chr916785531G-CHOMOINTERGENIC
SBS  Chr914451925C-THETINTRON
SBS  Chr98691954C-THOMOINTERGENIC

Deletions: 9

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr17168360716837616
Deletion  Chr125293643252936529
Deletion  Chr1767892976789334
Deletion  Chr333099769330997745
Deletion  Chr427976565279765661
Deletion  Chr7186711018671144
Deletion  Chr7280139428013962
Deletion  Chr910887835108878416LOC_Os09g17800
Deletion  Chr916699549166995534

Inversions: 2

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr22102142021050734
Inversion  Chr579527269639164LOC_Os05g14180

Translocations: 3

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr113596447Chr53820440
Translocation  Chr53820525Chr433760180
Translocation  Chr59642056Chr433760160