Mutant Information 

Mutant NameFN-186  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 23

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr1019840723A-GHOMOUTR_3_PRIME
SBS  Chr117978057A-GHETINTERGENIC
SBS  Chr1216754004C-THETINTERGENIC
SBS  Chr1214882468T-GHETINTERGENIC
SBS  Chr1214256173G-CHETINTERGENIC
SBS  Chr24118263A-THETINTRON
SBS  Chr232171202G-AHETINTERGENIC
SBS  Chr224702758C-THETINTERGENIC
SBS  Chr211561232C-THETINTERGENIC
SBS  Chr211336500T-CHOMOSYNONYMOUS_CODING
SBS  Chr35822987G-THETINTERGENIC
SBS  Chr37923264G-AHETINTERGENIC
SBS  Chr628300325C-THETINTERGENIC
SBS  Chr623011748G-AHETINTERGENIC
SBS  Chr65476146G-AHOMOINTERGENIC
SBS  Chr711235605G-AHETINTERGENIC
SBS  Chr86074954T-GHOMONON_SYNONYMOUS_CODINGLOC_Os08g10360
SBS  Chr824381402C-THETNON_SYNONYMOUS_CODINGLOC_Os08g38560
SBS  Chr811318299G-AHETINTERGENIC
SBS  Chr913496293G-THETINTERGENIC
SBS  Chr913496294A-THETINTERGENIC
SBS  Chr92728737A-GHETNON_SYNONYMOUS_CODINGLOC_Os09g05070
SBS  Chr91211156A-CHOMOUTR_5_PRIME

Deletions: 15

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr121933309219333134LOC_Os01g39010
Deletion  Chr139197105391971127
Deletion  Chr10532050853205091
Deletion  Chr10192530581925306810
Deletion  Chr1114326954143269584
Deletion  Chr1217039381170393909
Deletion  Chr210074128100741291
Deletion  Chr234247607342476147
Deletion  Chr2638165863816679
Deletion  Chr427285735272857361
Deletion  Chr5128919512891972
Deletion  Chr7382142838214324
Deletion  Chr9121115212111531LOC_Os09g02690
Deletion  Chr93506231350624312
Deletion  Chr9512801651280259

Insertions: 2

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr129036849036842
Insertion  Chr628033279280332791

Inversions: 2

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr81177996012708734
Inversion  Chr81177997312708737