Mutant Information 

Mutant NameFN-188  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 29

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr125369840C-THOMOINTRON
SBS  Chr1022524143T-CHETINTRON
SBS  Chr113999945A-THOMOINTERGENIC
SBS  Chr1113285391G-AHETINTERGENIC
SBS  Chr1121174328G-THETINTERGENIC
SBS  Chr1121906619C-THETINTRON
SBS  Chr1122280093C-AHETINTRON
SBS  Chr1123970129G-AHETINTERGENIC
SBS  Chr122814574G-THETINTERGENIC
SBS  Chr124288086A-GHETINTRON
SBS  Chr1210583626G-AHETINTERGENIC
SBS  Chr1221853337C-AHETINTERGENIC
SBS  Chr227156125A-GHETINTERGENIC
SBS  Chr315304566G-AHOMOINTRON
SBS  Chr421241280G-THETINTRON
SBS  Chr413175106C-THETINTERGENIC
SBS  Chr43029269A-GHOMOINTRON
SBS  Chr4443342A-CHOMOSYNONYMOUS_CODING
SBS  Chr513604792G-AHETINTERGENIC
SBS  Chr53213034C-THOMOINTRON
SBS  Chr510423712G-CHETINTERGENIC
SBS  Chr622084575A-GHETINTERGENIC
SBS  Chr712282728G-AHOMOINTERGENIC
SBS  Chr81407807T-AHETINTERGENIC
SBS  Chr819484464A-THETINTERGENIC
SBS  Chr87224333A-GHETINTERGENIC
SBS  Chr812628577G-AHETINTRON
SBS  Chr919832128T-CHETINTERGENIC
SBS  Chr94158519G-AHETINTERGENIC

Deletions: 22

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr139020536390205371
Deletion  Chr1115939331159393354
Deletion  Chr11567740056774033
Deletion  Chr11579285957928623
Deletion  Chr1120377307203773081
Deletion  Chr117731082773109614
Deletion  Chr212743804127438051
Deletion  Chr224850158248501591
Deletion  Chr2284782552847829843
Deletion  Chr2354747373547475720
Deletion  Chr314642870146428711LOC_Os03g25590
Deletion  Chr4627368662736904
Deletion  Chr516385107163851158
Deletion  Chr621962018219620191
Deletion  Chr7118725311872541
Deletion  Chr825660012627000610009
Deletion  Chr81500900115039000300007
Deletion  Chr91561919156193718
Deletion  Chr9815353816012659
Deletion  Chr918996120189961299
Deletion  Chr9819733781991321795LOC_Os09g13930
Deletion  Chr97502753750280451

Insertions: 2

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr1220711488207114882
Insertion  Chr226750362267503621

Inversions: 2

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr356338585863945
Inversion  Chr356338755863950

Translocations: 1

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr9815361Chr57434263LOC_Os05g13390