Mutant Information 

Mutant NameFN-189  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 48

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr17264737C-THETINTERGENIC
SBS  Chr138111374A-THETINTERGENIC
SBS  Chr138111373C-THETINTERGENIC
SBS  Chr134598488A-GHETINTRON
SBS  Chr131847859C-THETINTERGENIC
SBS  Chr116569387G-CHETNON_SYNONYMOUS_CODINGLOC_Os01g29560
SBS  Chr110696927C-THOMOINTERGENIC
SBS  Chr1020541353T-AHETINTERGENIC
SBS  Chr1021165216T-AHETINTERGENIC
SBS  Chr113067878A-GHETNON_SYNONYMOUS_CODINGLOC_Os11g06380
SBS  Chr1118323099C-AHETINTERGENIC
SBS  Chr1110294592C-GHOMOINTERGENIC
SBS  Chr116915677C-THOMOSYNONYMOUS_CODING
SBS  Chr12928467A-THETINTERGENIC
SBS  Chr124942168C-THETINTERGENIC
SBS  Chr1225929515C-THETINTERGENIC
SBS  Chr227524755A-THETINTERGENIC
SBS  Chr328200544C-AHETINTERGENIC
SBS  Chr325605571G-AHETINTERGENIC
SBS  Chr39045918C-THETINTERGENIC
SBS  Chr430221149T-GHOMONON_SYNONYMOUS_CODINGLOC_Os04g51050
SBS  Chr49513447G-AHETNON_SYNONYMOUS_CODINGLOC_Os04g17370
SBS  Chr419719919G-AHETINTERGENIC
SBS  Chr41653038T-GHETNON_SYNONYMOUS_CODINGLOC_Os04g03740
SBS  Chr417171017C-THETINTERGENIC
SBS  Chr432063884G-AHOMOUTR_5_PRIME
SBS  Chr421381342T-CHOMOINTRON
SBS  Chr434349722A-GHETINTRON
SBS  Chr55244113C-THOMOINTRON
SBS  Chr523660510G-CHETNON_SYNONYMOUS_CODINGLOC_Os05g40270
SBS  Chr54794471C-THOMOINTERGENIC
SBS  Chr51982016C-THOMOINTERGENIC
SBS  Chr624180715C-THOMOSYNONYMOUS_CODING
SBS  Chr78914668G-THETINTERGENIC
SBS  Chr710900669C-GHETNON_SYNONYMOUS_CODINGLOC_Os07g18410
SBS  Chr728169912G-AHETINTERGENIC
SBS  Chr712962864C-THOMOINTERGENIC
SBS  Chr722710315G-AHOMOINTERGENIC
SBS  Chr811186889A-GHETINTERGENIC
SBS  Chr85377270A-GHETINTERGENIC
SBS  Chr85762893C-AHETINTERGENIC
SBS  Chr821396007C-GHETINTERGENIC
SBS  Chr818120331T-CHETINTERGENIC
SBS  Chr87516616T-CHOMOINTERGENIC
SBS  Chr922594118G-AHOMOINTERGENIC
SBS  Chr919382949A-GHETINTERGENIC
SBS  Chr920330377A-THETUTR_3_PRIME
SBS  Chr916816762A-THOMOINTERGENIC

Deletions: 32

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr1156474215647442LOC_Os01g03740
Deletion  Chr129711023297110252
Deletion  Chr138109618381109091291
Deletion  Chr1284642328464252
Deletion  Chr138547866385491911325
Deletion  Chr10523204552320472
Deletion  Chr10206169062061691812LOC_Os10g38690
Deletion  Chr11478857347885818LOC_Os11g09010
Deletion  Chr1116958187169581881
Deletion  Chr1220339543203395463LOC_Os12g33690
Deletion  Chr227426216274272771061LOC_Os02g45180
Deletion  Chr2183077918307801
Deletion  Chr328787358287873591
Deletion  Chr36493406493488LOC_Os03g02040
Deletion  Chr3283822642838228824
Deletion  Chr434901963349019641LOC_Os04g58700
Deletion  Chr44691426469143610
Deletion  Chr429778267297782758LOC_Os04g49930
Deletion  Chr4565736656573671
Deletion  Chr431857468318574757LOC_Os04g53496
Deletion  Chr5428729942873089
Deletion  Chr5185268718526914
Deletion  Chr522693633226936341
Deletion  Chr6180364218036431
Deletion  Chr614302284143022851
Deletion  Chr6218826672207903019636328
Deletion  Chr6155002715500303
Deletion  Chr7328873632887371LOC_Os07g06740
Deletion  Chr714513856145138593
Deletion  Chr714689240146892488
Deletion  Chr921657901216579032LOC_Os09g37580
Deletion  Chr915745605157456072

Insertions: 18

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr123909458239094586
Insertion  Chr10223801322380132
Insertion  Chr1021194276211942762
Insertion  Chr11780094778009471
Insertion  Chr1122909970229099707
Insertion  Chr1127467375274673753
Insertion  Chr12246209532462095318
Insertion  Chr2185412241854122420
Insertion  Chr428175908281759084
Insertion  Chr432200739322007392
Insertion  Chr5561729556172951
Insertion  Chr5172049771720497720
Insertion  Chr521674373216743732
Insertion  Chr6449263044926303
Insertion  Chr624037839240378394
Insertion  Chr8921204292120421
Insertion  Chr824213433242134334
Insertion  Chr922312981223129814

Inversions: 3

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr22495973624993385LOC_Os02g41610
Inversion  Chr22495973624993385LOC_Os02g41670
Inversion  Chr7159893223105