Mutant Information 

Mutant NameFN-190  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 24

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr118519106C-THETINTERGENIC
SBS  Chr1016866361A-THETINTERGENIC
SBS  Chr1011929264G-AHETINTERGENIC
SBS  Chr1121482698A-THETINTRON
SBS  Chr1211344789T-GHETINTERGENIC
SBS  Chr332495515G-THETINTERGENIC
SBS  Chr316839616T-AHETINTRON
SBS  Chr32737268G-AHETINTERGENIC
SBS  Chr4135640C-GHOMOINTERGENIC
SBS  Chr47333035C-THOMOINTRON
SBS  Chr413471933G-CHOMOINTERGENIC
SBS  Chr59969467G-CHETINTERGENIC
SBS  Chr55305235A-THETINTERGENIC
SBS  Chr55305234C-THETINTERGENIC
SBS  Chr519985030C-AHETINTRON
SBS  Chr68562372G-AHETNON_SYNONYMOUS_CODINGLOC_Os06g15100
SBS  Chr728582309A-GHETINTERGENIC
SBS  Chr717923713T-CHETINTRON
SBS  Chr710784983G-AHETSYNONYMOUS_CODING
SBS  Chr86757349G-AHETINTERGENIC
SBS  Chr825534117C-THETINTERGENIC
SBS  Chr81964930T-GHETNON_SYNONYMOUS_CODINGLOC_Os08g04050
SBS  Chr96710614T-AHETINTERGENIC
SBS  Chr96727422T-GHETINTERGENIC

Deletions: 22

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr1187179818717991
Deletion  Chr130348021303480221LOC_Os01g52750
Deletion  Chr127111286271112904
Deletion  Chr10201836772018368710LOC_Os10g37720
Deletion  Chr105165512516552715
Deletion  Chr104876423487643411
Deletion  Chr11212971752129721237
Deletion  Chr12271737427173773
Deletion  Chr227921312279213142
Deletion  Chr27025067702507912LOC_Os02g13180
Deletion  Chr330370453303704563
Deletion  Chr3164145811641459817
Deletion  Chr422082517220825181
Deletion  Chr513186900131869044
Deletion  Chr531486803149218538
Deletion  Chr65101565101582
Deletion  Chr727240708272407091
Deletion  Chr817833224178332251
Deletion  Chr8268166392681666526
Deletion  Chr9696247369624741
Deletion  Chr915400893154008952
Deletion  Chr9453384245338508

Insertions: 21

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr121528817215288174
Insertion  Chr130600695306006951
Insertion  Chr140482421404824213
Insertion  Chr1015203369152033692
Insertion  Chr11162314516231452
Insertion  Chr11276473327647333LOC_Os11g05880
Insertion  Chr11782934678293462
Insertion  Chr1119595026195950262
Insertion  Chr1126216523262165232
Insertion  Chr126734503673450315
Insertion  Chr2711029671102961
Insertion  Chr216777344167773442
Insertion  Chr224146279241462794
Insertion  Chr228273511282735116LOC_Os02g46410
Insertion  Chr423528527235285272
Insertion  Chr5468461546846151
Insertion  Chr6430007343000734
Insertion  Chr6727687472768746
Insertion  Chr7849756184975611
Insertion  Chr716366107163661073
Insertion  Chr9898168189816812

Inversions: 5

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr272429537271480
Inversion  Chr432299520587LOC_Os04g01040
Inversion  Chr432299520587LOC_Os04g01810
Inversion  Chr432311520606LOC_Os04g01040
Inversion  Chr432311520606LOC_Os04g01810