Mutant Information 

Mutant NameFN-194  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 22

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr19585204A-GHETINTERGENIC
SBS  Chr110313755G-THETNON_SYNONYMOUS_CODINGLOC_Os01g18360
SBS  Chr105828868C-THETINTERGENIC
SBS  Chr108321549T-AHETINTRON
SBS  Chr1010994696A-GHETINTRON
SBS  Chr1011136974G-AHETINTERGENIC
SBS  Chr1018691051A-CHETINTRON
SBS  Chr1018752117G-AHETINTRON
SBS  Chr113188762C-AHETNON_SYNONYMOUS_CODINGLOC_Os11g06600
SBS  Chr1113943003G-THETINTRON
SBS  Chr1118311204T-CHETINTERGENIC
SBS  Chr329242170T-CHETINTERGENIC
SBS  Chr427730867G-AHOMONON_SYNONYMOUS_CODINGLOC_Os04g46770
SBS  Chr516319094G-AHETSYNONYMOUS_CODING
SBS  Chr623067089T-CHETINTRON
SBS  Chr6310236C-THETINTERGENIC
SBS  Chr721244112G-AHOMOINTERGENIC
SBS  Chr713432293C-THETINTERGENIC
SBS  Chr83424097G-AHETNON_SYNONYMOUS_CODINGLOC_Os08g06200
SBS  Chr95773139A-CHETINTERGENIC
SBS  Chr914988892A-CHETINTERGENIC
SBS  Chr911173976A-GHETINTRON

Deletions: 27

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr1376777937677801
Deletion  Chr126103567261035681
Deletion  Chr1015487236154872404LOC_Os10g29790
Deletion  Chr11165616531656168431
Deletion  Chr11941426794142714
Deletion  Chr1115113386151133915
Deletion  Chr122644050626441179673
Deletion  Chr12429390842939091
Deletion  Chr12955312895531346
Deletion  Chr226239410262394199
Deletion  Chr2610364561036461
Deletion  Chr313908782139087864
Deletion  Chr3146062181460624729
Deletion  Chr322850582228505831
Deletion  Chr48054978805499113
Deletion  Chr429480872294808764LOC_Os04g49394
Deletion  Chr4245241224524197
Deletion  Chr523266576232665771LOC_Os05g39620
Deletion  Chr51011000110173000630005
Deletion  Chr65399735539977944
Deletion  Chr6834808583480883
Deletion  Chr7182461018246122
Deletion  Chr724370506243705071
Deletion  Chr814154488141544891
Deletion  Chr8178519391785196324LOC_Os08g29160
Deletion  Chr99216787921680417
Deletion  Chr915867158158671602

Insertions: 1

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr311499487114994871

Inversions: 3

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr42798270228110963LOC_Os04g47360
Inversion  Chr42798271628110967LOC_Os04g47360
Inversion  Chr541474074271553LOC_Os05g07710

Translocations: 3

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr1226440544Chr64264518LOC_Os06g08564
Translocation  Chr1226441164Chr64264510LOC_Os06g08564
Translocation  Chr727532074Chr128241034LOC_Os07g46130