Mutant Information 

Mutant NameFN-196  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 24

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr1944464G-AHETINTRON
SBS  Chr18506395A-CHETINTERGENIC
SBS  Chr115822984C-THETINTERGENIC
SBS  Chr118055037A-GHOMOINTERGENIC
SBS  Chr133398332C-THOMOINTERGENIC
SBS  Chr136469389A-GHETINTRON
SBS  Chr1016912438G-AHETINTERGENIC
SBS  Chr1012054690G-THOMOINTERGENIC
SBS  Chr1124963387T-CHOMOINTERGENIC
SBS  Chr1218123321T-GHETINTERGENIC
SBS  Chr124553251C-GHETNON_SYNONYMOUS_CODINGLOC_Os12g08820
SBS  Chr12109759G-AHETNON_SYNONYMOUS_CODINGLOC_Os12g01190
SBS  Chr1219269759C-THETINTERGENIC
SBS  Chr1219467535C-THETINTERGENIC
SBS  Chr211371016G-AHOMOINTERGENIC
SBS  Chr234963077A-GHETINTERGENIC
SBS  Chr34019303G-AHETINTERGENIC
SBS  Chr315824415C-THETINTRON
SBS  Chr47541119G-CHETSYNONYMOUS_CODING
SBS  Chr512255342G-AHOMOINTERGENIC
SBS  Chr716692830A-GHOMOINTERGENIC
SBS  Chr714839163G-THOMOSYNONYMOUS_CODING
SBS  Chr918832826C-THETINTERGENIC
SBS  Chr912882057A-THETINTERGENIC

Deletions: 17

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr111232061112336331572LOC_Os01g19800
Deletion  Chr121380045213800483
Deletion  Chr10194084791940849011LOC_Os10g36310
Deletion  Chr10510963251096419
Deletion  Chr1110563755105637583
Deletion  Chr3320753613207537716
Deletion  Chr4275787862757882943
Deletion  Chr431238935312389394
Deletion  Chr4253158825315924
Deletion  Chr610767595107676027LOC_Os06g18940
Deletion  Chr625941040259410444
Deletion  Chr74933727493373710
Deletion  Chr8185683081856834133
Deletion  Chr817076480170764811LOC_Os08g28030
Deletion  Chr8544607254481472075LOC_Os08g09390
Deletion  Chr815090410150904122
Deletion  Chr8760857376085785

Insertions: 2

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr12463335646333561
Insertion  Chr431490833314908333

Inversions: 2

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr12904883429396894
Inversion  Chr12905365529396903

Translocations: 3

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr1118831300Chr111233633LOC_Os01g19800
Translocation  Chr1118831314Chr111232064LOC_Os01g19800
Translocation  Chr921400445Chr854481302