Mutant Information 

Mutant NameFN-199  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 39

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr114693312T-CHETNON_SYNONYMOUS_CODINGLOC_Os01g25900
SBS  Chr10425098C-THETINTERGENIC
SBS  Chr1011386897C-THETINTRON
SBS  Chr1018611944C-AHETNON_SYNONYMOUS_CODINGLOC_Os10g34880
SBS  Chr1019978566T-GHETINTERGENIC
SBS  Chr1111272610G-AHOMOSYNONYMOUS_CODING
SBS  Chr129990267T-CHETINTERGENIC
SBS  Chr1211492248G-CHETINTERGENIC
SBS  Chr1221602849A-GHOMOINTERGENIC
SBS  Chr1221845611A-GHOMOINTERGENIC
SBS  Chr311346518T-CHOMOINTERGENIC
SBS  Chr314833580C-AHETINTERGENIC
SBS  Chr314833579C-AHETINTERGENIC
SBS  Chr34467224C-THETINTERGENIC
SBS  Chr412629186G-THETINTERGENIC
SBS  Chr412629183G-THETINTERGENIC
SBS  Chr4562749T-CHETINTERGENIC
SBS  Chr428456056T-AHETINTERGENIC
SBS  Chr433932241T-GHETINTERGENIC
SBS  Chr434843544T-GHETINTERGENIC
SBS  Chr434282904A-GHETINTRON
SBS  Chr416321911C-AHETINTERGENIC
SBS  Chr526503154A-CHETINTRON
SBS  Chr526503153T-AHETINTRON
SBS  Chr514004213A-GHETNON_SYNONYMOUS_CODINGLOC_Os05g24210
SBS  Chr510980734C-GHETNON_SYNONYMOUS_CODINGLOC_Os05g18910
SBS  Chr62629341G-AHETINTERGENIC
SBS  Chr611838112C-THOMONON_SYNONYMOUS_CODINGLOC_Os06g20560
SBS  Chr619581695G-CHOMOINTERGENIC
SBS  Chr716536956A-THOMOINTERGENIC
SBS  Chr722565282A-THOMOINTERGENIC
SBS  Chr822771391T-AHETINTERGENIC
SBS  Chr82939322T-CHETINTRON
SBS  Chr818607040C-THETINTERGENIC
SBS  Chr824232607A-THETINTERGENIC
SBS  Chr921858636C-THETUTR_3_PRIME
SBS  Chr911496598C-AHOMOINTRON
SBS  Chr911496597G-AHOMOINTRON
SBS  Chr99098934C-THOMOINTRON

Deletions: 12

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr130524589305259521363LOC_Os01g53130
Deletion  Chr1110580011106700090002
Deletion  Chr1226573076265730771
Deletion  Chr12265812862658132034
Deletion  Chr12233172722331728917
Deletion  Chr228563789285637967
Deletion  Chr411658597116586003LOC_Os04g20774
Deletion  Chr6547999654800004
Deletion  Chr6547999054799955
Deletion  Chr627366149273696083459LOC_Os06g45280
Deletion  Chr725471157254711658
Deletion  Chr81407167140718114

Insertions: 2

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr1017327222173272221
Insertion  Chr625828449258284492

Inversions: 2

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr81508782115169857
Inversion  Chr81508783915169972

Translocations: 2

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr416846587Chr1305259322
Translocation  Chr416846611Chr130524589LOC_Os04g28460