Mutant Information 

Mutant NameFN-20  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 11

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr115900968G-CHomoINTERGENIC
SBS  Chr139211260C-THomoINTERGENIC
SBS  Chr25504339A-THomoUTR_3_PRIME
SBS  Chr224906512C-THomoINTERGENIC
SBS  Chr226417803T-AHomoINTERGENIC
SBS  Chr322419102A-THomoINTERGENIC
SBS  Chr311134227A-GHomoINTERGENIC
SBS  Chr3767187G-AHomoSTOP_GAINEDLOC_Os03g02260
SBS  Chr512627675A-GHomoSYNONYMOUS_CODING
SBS  Chr620001693T-AHomoINTERGENIC
SBS  Chr621365431C-THomoINTERGENIC

Deletions: 12

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr1336610883366110113
Deletion  Chr133601470336014766LOC_Os01g58100
Deletion  Chr1012089547120895492
Deletion  Chr3104591581045917921LOC_Os03g18680
Deletion  Chr524045119240451201
Deletion  Chr5516304851630502
Deletion  Chr5688024268802453
Deletion  Chr621207780212077811
Deletion  Chr620001684200016884
Deletion  Chr7336248633634739872
Deletion  Chr719759559197595634
Deletion  Chr819899906198999082

Insertions: 3

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr125245398252453982
Insertion  Chr1128474874284748742
Insertion  Chr916769920167699201

Inversions: 3

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr1022615173177864LOC_Os10g04730
Inversion  Chr1022615173177864LOC_Os10g06200
Inversion  Chr71811028318124079LOC_Os07g30600

Translocations: 3

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr73362486Chr266790342
Translocation  Chr73363470Chr266790242
Translocation  Chr128335893Chr127308631LOC_Os01g47740