Mutant Information 

Mutant NameFN-200  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 30

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr11081568C-AHETUTR_5_PRIME
SBS  Chr117766350T-CHETINTERGENIC
SBS  Chr122202608A-GHOMOINTERGENIC
SBS  Chr126418162G-THOMOINTERGENIC
SBS  Chr142331427T-GHETINTRON
SBS  Chr1123509455T-GHETINTRON
SBS  Chr128376825G-THOMOINTRON
SBS  Chr218545096A-CHOMOINTERGENIC
SBS  Chr218549397C-THOMOINTRON
SBS  Chr218549398G-THOMOINTRON
SBS  Chr2420184A-GHOMONON_SYNONYMOUS_CODINGLOC_Os02g01750
SBS  Chr215587847T-CHETUTR_3_PRIME
SBS  Chr38146835G-CHETINTERGENIC
SBS  Chr318162644A-THOMOINTERGENIC
SBS  Chr319310737C-AHOMOINTRON
SBS  Chr424414994G-AHETINTERGENIC
SBS  Chr425093511A-THETINTERGENIC
SBS  Chr417419778G-AHETINTERGENIC
SBS  Chr44468851A-GHETINTERGENIC
SBS  Chr53537961T-CHETINTERGENIC
SBS  Chr527915055C-THETINTERGENIC
SBS  Chr67760386T-CHETNON_SYNONYMOUS_CODINGLOC_Os06g13920
SBS  Chr617364850G-AHOMOINTERGENIC
SBS  Chr61650948G-THETSYNONYMOUS_CODING
SBS  Chr61623146C-THETINTERGENIC
SBS  Chr624377401G-AHOMOINTERGENIC
SBS  Chr75786796C-AHETINTERGENIC
SBS  Chr88552832G-AHOMOSYNONYMOUS_CODING
SBS  Chr821133735G-AHETINTERGENIC
SBS  Chr827746761C-THETINTERGENIC

Deletions: 17

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr1797333679733371
Deletion  Chr1018390011880000410006
Deletion  Chr11177636317763652LOC_Os11g04290
Deletion  Chr1120071318201037543243618
Deletion  Chr12289372828937335
Deletion  Chr1218164792181647997
Deletion  Chr121683651683683LOC_Os12g01290
Deletion  Chr21253900112557000180004
Deletion  Chr212377193123772029
Deletion  Chr2160964471609645912
Deletion  Chr3536701553670161
Deletion  Chr47396837396907
Deletion  Chr429515180295151811LOC_Os04g49490
Deletion  Chr5144041191440413112LOC_Os05g24860
Deletion  Chr62138698213870911LOC_Os06g04870
Deletion  Chr729226039292260401
Deletion  Chr86187836187841

Insertions: 2

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr3825483782548372
Insertion  Chr5384956838495682

Inversions: 7

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr12315726227995467
Inversion  Chr21148388111486009LOC_Os02g19640
Inversion  Chr21148388111486009LOC_Os02g19650
Inversion  Chr21148390511776049LOC_Os02g19640
Inversion  Chr21148390511776049LOC_Os02g20000
Inversion  Chr21148604912557657LOC_Os02g19650
Inversion  Chr21177547712539029LOC_Os02g20000

Translocations: 1

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr1226283715Chr211775490LOC_Os02g20000