Mutant Information 

Mutant NameFN-202  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 39

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr12054824C-AHOMOINTRON
SBS  Chr14812020C-GHETINTERGENIC
SBS  Chr118846146C-THETINTERGENIC
SBS  Chr101125867G-THETINTERGENIC
SBS  Chr1111586236T-CHETINTRON
SBS  Chr1114936758G-CHETINTERGENIC
SBS  Chr121669130G-AHETINTERGENIC
SBS  Chr1215804124G-AHETINTERGENIC
SBS  Chr1219058134A-GHETINTRON
SBS  Chr1223805461G-AHETSYNONYMOUS_CODING
SBS  Chr1225862261G-AHETSYNONYMOUS_CODING
SBS  Chr24461470C-THOMOINTRON
SBS  Chr220164573G-AHOMOSYNONYMOUS_CODING
SBS  Chr21018191A-GHETINTRON
SBS  Chr33908433G-AHETINTERGENIC
SBS  Chr32648743C-THOMOINTERGENIC
SBS  Chr32648742C-THOMOINTERGENIC
SBS  Chr332415503T-CHOMOINTERGENIC
SBS  Chr310704768C-THETNON_SYNONYMOUS_CODINGLOC_Os03g19104
SBS  Chr431413523A-THETNON_SYNONYMOUS_CODINGLOC_Os04g52760
SBS  Chr431377416C-THETINTERGENIC
SBS  Chr423070062C-AHETINTERGENIC
SBS  Chr423058873G-THETINTERGENIC
SBS  Chr417468756G-THETINTERGENIC
SBS  Chr414634163C-THETINTERGENIC
SBS  Chr517407639A-THOMOINTERGENIC
SBS  Chr55074170C-AHETNON_SYNONYMOUS_CODINGLOC_Os05g09110
SBS  Chr55738708C-THETINTERGENIC
SBS  Chr520102967G-THOMOUTR_3_PRIME
SBS  Chr524118464G-AHETSYNONYMOUS_CODING
SBS  Chr621770702G-AHETINTERGENIC
SBS  Chr65496827C-AHOMOINTERGENIC
SBS  Chr723128665C-THETINTERGENIC
SBS  Chr73281463G-AHETINTERGENIC
SBS  Chr717963923G-AHETNON_SYNONYMOUS_CODINGLOC_Os07g30350
SBS  Chr810435060C-THETNON_SYNONYMOUS_CODINGLOC_Os08g17040
SBS  Chr84390024T-CHETINTERGENIC
SBS  Chr98696998T-GHETINTRON
SBS  Chr97827552T-CHETINTERGENIC

Deletions: 22

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr113217488132174968
Deletion  Chr1232778272327783912
Deletion  Chr137411025374110327
Deletion  Chr1117369517173695214
Deletion  Chr1111773410117734166
Deletion  Chr335694799356948001LOC_Os03g63150
Deletion  Chr3358094293580944314
Deletion  Chr316023274160232751
Deletion  Chr416984531169845321LOC_Os04g28670
Deletion  Chr4150332315033241
Deletion  Chr4147298714729881
Deletion  Chr419779755197797583
Deletion  Chr514107603141076041LOC_Os05g24430
Deletion  Chr613450582134505853LOC_Os06g23070
Deletion  Chr6891099789110025
Deletion  Chr611319399113194034
Deletion  Chr7522859652319773381LOC_Os07g09830
Deletion  Chr7288978082889782214
Deletion  Chr719026030190260322
Deletion  Chr717905528179055291
Deletion  Chr822317912223179197
Deletion  Chr9138313611383137918

Insertions: 6

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr10258570225857023
Insertion  Chr11218850721885071
Insertion  Chr1128824595288245952
Insertion  Chr3818669381866933LOC_Os03g15000
Insertion  Chr628570986285709861
Insertion  Chr821075346210753462

Inversions: 4

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr112757914328852790LOC_Os11g45560
Inversion  Chr112757914328852790LOC_Os11g47830
Inversion  Chr112875491228852779LOC_Os11g47580
Inversion  Chr112875491228852779LOC_Os11g47830

Translocations: 1

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr913612984Chr135351937