Mutant Information 

Mutant NameFN-21  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 16

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr1216070043G-CHomoINTERGENIC
SBS  Chr219067207G-AHomoINTERGENIC
SBS  Chr228524195A-CHomoINTRON
SBS  Chr314655721G-AHomoINTERGENIC
SBS  Chr4569718C-THomoNON_SYNONYMOUS_CODINGLOC_Os04g01910
SBS  Chr528758118C-AHomoNON_SYNONYMOUS_CODINGLOC_Os05g50180
SBS  Chr528758113G-AHomoSYNONYMOUS_CODING
SBS  Chr523859933T-CHomoINTERGENIC
SBS  Chr54176717G-THomoUTR_3_PRIME
SBS  Chr54053358G-AHomoINTERGENIC
SBS  Chr52368620G-AHomoINTRON
SBS  Chr51929293C-AHomoINTERGENIC
SBS  Chr54176718T-AHomoUTR_3_PRIME
SBS  Chr718698321G-AHomoINTERGENIC
SBS  Chr92992485C-AHomoNON_SYNONYMOUS_CODINGLOC_Os09g06360
SBS  Chr919874315G-AHomoINTERGENIC

Deletions: 12

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr122392226223922326
Deletion  Chr1323634293236344920
Deletion  Chr1220046459200520255566
Deletion  Chr4735707673570782
Deletion  Chr5215312522153126715
Deletion  Chr5211840562118413377
Deletion  Chr6221549122154921
Deletion  Chr8573868857386913
Deletion  Chr8109148931091490411
Deletion  Chr8205359682053598214
Deletion  Chr920214455202144561LOC_Os09g34230
Deletion  Chr9100244621002447311

Insertions: 1

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr921455305214553052

Inversions: 3

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr121917818919893506
Inversion  Chr121917998419893514
Inversion  Chr861819196183177

Translocations: 2

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr1220046458Chr132017108LOC_Os01g55580
Translocation  Chr1220052011Chr132017154LOC_Os01g55580