Mutant Information 

Mutant NameFN-22  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 14

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr122381175A-GHomoINTRON
SBS  Chr1012437042G-AHomoINTRON
SBS  Chr1012437040T-AHomoINTRON
SBS  Chr1012437044C-AHomoINTRON
SBS  Chr310738802T-CHomoINTERGENIC
SBS  Chr329780711C-THomoINTERGENIC
SBS  Chr332909811A-GHomoINTERGENIC
SBS  Chr513822687T-AHomoINTERGENIC
SBS  Chr528027874C-AHomoINTERGENIC
SBS  Chr517535487G-AHomoINTERGENIC
SBS  Chr516152684C-THomoUTR_3_PRIME
SBS  Chr66784935G-THomoINTERGENIC
SBS  Chr7962449A-THomoINTRON
SBS  Chr93200050C-GHomoINTRON

Deletions: 16

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr1225279082252791911
Deletion  Chr1597634259763431
Deletion  Chr13440585344059813
Deletion  Chr117728461177284632
Deletion  Chr1122721757227217581
Deletion  Chr1126640715266407172
Deletion  Chr12374938937493901LOC_Os12g07530
Deletion  Chr1210011171100111721LOC_Os12g17480
Deletion  Chr1217170396171703971LOC_Os12g29020
Deletion  Chr2447213044721322
Deletion  Chr527948298279483035
Deletion  Chr5270893327089363LOC_Os05g05440
Deletion  Chr621686060216860611
Deletion  Chr6257447212575136366422
Deletion  Chr712883731128837321
Deletion  Chr83772033772107

Insertions: 5

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr143129334431293341
Insertion  Chr11578428657842861
Insertion  Chr610369851103698512
Insertion  Chr819998614199986141
Insertion  Chr820289288202892883

Inversions: 2

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr61226844825751349
Inversion  Chr91112558114081352LOC_Os09g18159

Translocations: 2

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr522453748Chr310210985LOC_Os05g38300
Translocation  Chr522454003Chr310211030