Mutant Information 

Mutant NameFN-225  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 32

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr1611148T-AHETINTERGENIC
SBS  Chr119687663G-AHETINTERGENIC
SBS  Chr137992810T-AHETINTERGENIC
SBS  Chr1014356938G-AHOMOINTERGENIC
SBS  Chr1014356939T-AHOMOINTERGENIC
SBS  Chr1015484146C-THETINTERGENIC
SBS  Chr1124733614C-THETINTERGENIC
SBS  Chr1210876008C-AHETINTRON
SBS  Chr1210876009C-AHETINTRON
SBS  Chr1214422434G-CHETINTERGENIC
SBS  Chr1216443819C-AHETINTRON
SBS  Chr218447514C-THETINTRON
SBS  Chr312323952C-THETINTERGENIC
SBS  Chr315334275C-THOMONON_SYNONYMOUS_CODINGLOC_Os03g26870
SBS  Chr328725446C-AHOMOINTERGENIC
SBS  Chr526971180T-AHOMOINTERGENIC
SBS  Chr55774900T-CHETINTERGENIC
SBS  Chr512818200C-THETINTERGENIC
SBS  Chr614404371A-THETNON_SYNONYMOUS_CODINGLOC_Os06g24570
SBS  Chr66181979C-GHETINTERGENIC
SBS  Chr726967696C-THETINTERGENIC
SBS  Chr726967703A-THETINTERGENIC
SBS  Chr74761748G-AHETINTERGENIC
SBS  Chr78778585T-AHETINTERGENIC
SBS  Chr719414242G-CHETINTERGENIC
SBS  Chr726967711T-GHETINTERGENIC
SBS  Chr724088619C-THETNON_SYNONYMOUS_CODINGLOC_Os07g40150
SBS  Chr86031419C-GHOMOINTERGENIC
SBS  Chr84626045T-AHETINTERGENIC
SBS  Chr824225596A-THETINTRON
SBS  Chr87159199G-AHETINTERGENIC
SBS  Chr91170619T-AHETINTERGENIC

Deletions: 32

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr12934212293423018
Deletion  Chr1141948471419489548
Deletion  Chr125167402251674042
Deletion  Chr1264102192641023819
Deletion  Chr110132704101327095
Deletion  Chr1382236533822366512
Deletion  Chr1022734636227346371
Deletion  Chr1216308623163086241LOC_Os12g27680
Deletion  Chr1221492094214920951LOC_Os12g35350
Deletion  Chr1219684341196843476
Deletion  Chr229034011290340132LOC_Os02g47520
Deletion  Chr213812899138129045
Deletion  Chr2180696171806966548LOC_Os02g30330
Deletion  Chr3669136166913698LOC_Os03g12600
Deletion  Chr3211810832118109310
Deletion  Chr4215436021543611
Deletion  Chr435501523355015252
Deletion  Chr411685824116858306
Deletion  Chr421037564210375673
Deletion  Chr56553700655371616
Deletion  Chr6144025331440255421
Deletion  Chr627327716273277171
Deletion  Chr6356697735669858LOC_Os06g07420
Deletion  Chr66697842669786422LOC_Os06g12360
Deletion  Chr619625617196256258
Deletion  Chr66668951666896413
Deletion  Chr7457053545705361
Deletion  Chr71892276189228610
Deletion  Chr819995139199951401
Deletion  Chr819995140199951411
Deletion  Chr9570835857083591
Deletion  Chr9851973085197311

Insertions: 23

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr1491529349152932
Insertion  Chr1496744649674466
Insertion  Chr139804019398040192
Insertion  Chr111865981865984
Insertion  Chr11629945062994504
Insertion  Chr1128819193288191934
Insertion  Chr1223490639234906392
Insertion  Chr2793542779354274
Insertion  Chr224578447245784473
Insertion  Chr226971183269711833
Insertion  Chr325745703257457033
Insertion  Chr43477303477304
Insertion  Chr416721856167218563
Insertion  Chr423776747237767471
Insertion  Chr431505595315055952
Insertion  Chr431802144318021441LOC_Os04g53390
Insertion  Chr6442159244215922
Insertion  Chr624037839240378394
Insertion  Chr7334487533448752LOC_Os07g06850
Insertion  Chr7776913377691331
Insertion  Chr7172449551724495512LOC_Os07g29360
Insertion  Chr9474339947433994
Insertion  Chr9795610479561044