Mutant Information 

Mutant NameFN-227  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 24

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr19603230C-THETNON_SYNONYMOUS_CODINGLOC_Os01g16840
SBS  Chr132718221C-THETINTERGENIC
SBS  Chr141143977G-AHETINTERGENIC
SBS  Chr1128536443G-AHETINTRON
SBS  Chr1115499908A-GHOMOINTERGENIC
SBS  Chr1110404950T-CHETSYNONYMOUS_CODING
SBS  Chr129994886A-GHOMOINTERGENIC
SBS  Chr233815671A-THETINTERGENIC
SBS  Chr222881630G-CHOMOINTERGENIC
SBS  Chr214407467A-GHOMOINTRON
SBS  Chr34341857A-CHETINTRON
SBS  Chr425205047C-THOMOINTERGENIC
SBS  Chr524787293G-AHETINTERGENIC
SBS  Chr627263314A-GHOMOINTRON
SBS  Chr615669323G-AHETINTRON
SBS  Chr716620370A-THETINTERGENIC
SBS  Chr822701182G-AHOMOINTERGENIC
SBS  Chr815608449C-THETINTRON
SBS  Chr815262112T-CHETINTRON
SBS  Chr814214839A-CHETINTRON
SBS  Chr811782010T-AHETUTR_3_PRIME
SBS  Chr85616538G-THETINTERGENIC
SBS  Chr85372728T-GHETINTERGENIC
SBS  Chr81703350A-GHETINTERGENIC

Deletions: 21

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr1497758849775891
Deletion  Chr1497759249775931
Deletion  Chr1010245142102451442
Deletion  Chr1122395054223950606
Deletion  Chr11178320011797700014500021
Deletion  Chr11151176551511772469
Deletion  Chr291497891499113
Deletion  Chr2489605148960521
Deletion  Chr2312995933129960613LOC_Os02g51150
Deletion  Chr232957975329579838
Deletion  Chr210995867109958725LOC_Os02g18840
Deletion  Chr2303574733035748815
Deletion  Chr334628413346284141
Deletion  Chr3342730703427308919
Deletion  Chr510522345105223505
Deletion  Chr5898666889866713
Deletion  Chr524178053241780618LOC_Os05g41270
Deletion  Chr6146035291460356031
Deletion  Chr727999217279992181
Deletion  Chr89238976923899317
Deletion  Chr8111405271114054417

Insertions: 2

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr12781359278135922
Insertion  Chr224964446249644461

Translocations: 2

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr1117831846Chr132365399
Translocation  Chr1117832901Chr132365359