Mutant Information 

Mutant NameFN-228  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 29

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr110563766A-GHETINTRON
SBS  Chr117787185A-THETINTERGENIC
SBS  Chr120603868G-THETINTERGENIC
SBS  Chr132755922A-GHETINTRON
SBS  Chr1013274191T-AHETINTERGENIC
SBS  Chr1015201043A-GHETUTR_3_PRIME
SBS  Chr1016056175A-THOMOSYNONYMOUS_CODING
SBS  Chr1111962215T-AHETINTRON
SBS  Chr1119175080T-CHETINTERGENIC
SBS  Chr1226254693G-AHETINTERGENIC
SBS  Chr28957402C-THOMOINTERGENIC
SBS  Chr234614182C-THETSYNONYMOUS_CODING
SBS  Chr221515964C-GHETINTERGENIC
SBS  Chr215475597G-THOMOINTRON
SBS  Chr324085890G-AHETINTERGENIC
SBS  Chr42007181C-AHETNON_SYNONYMOUS_CODINGLOC_Os04g04290
SBS  Chr429375153A-CHOMOINTERGENIC
SBS  Chr423297364A-THETINTRON
SBS  Chr516143458C-THOMOINTRON
SBS  Chr58124108G-AHOMOINTRON
SBS  Chr63743842A-GHETINTERGENIC
SBS  Chr68819816A-GHETINTERGENIC
SBS  Chr724033496G-AHOMOINTERGENIC
SBS  Chr722105537C-THETINTERGENIC
SBS  Chr78154681C-AHETINTERGENIC
SBS  Chr728083487T-AHOMOINTERGENIC
SBS  Chr812917824A-GHETNON_SYNONYMOUS_CODINGLOC_Os08g21680
SBS  Chr96735634G-CHETINTERGENIC
SBS  Chr916695657A-GHETINTERGENIC

Deletions: 15

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr117811110178126431533
Deletion  Chr137360549373605523LOC_Os01g64370
Deletion  Chr126162775261627761
Deletion  Chr1911320891132168
Deletion  Chr101586953158696512
Deletion  Chr1015201046152010471LOC_Os10g29180
Deletion  Chr125392152539217321LOC_Os12g10200
Deletion  Chr2407096440709662
Deletion  Chr326333692263336931
Deletion  Chr516050013160500174
Deletion  Chr612719236127192448LOC_Os06g21990
Deletion  Chr711082075110820827
Deletion  Chr7815167681516815
Deletion  Chr9211265262112654014
Deletion  Chr919442269194422701

Inversions: 4

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr11590079615920108
Inversion  Chr121840982718430286LOC_Os12g30690
Inversion  Chr421723895326992LOC_Os04g04540
Inversion  Chr835664044417000