Mutant Information 

Mutant NameFN-241  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 26

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr119662749T-AHETNON_SYNONYMOUS_CODINGLOC_Os01g35540
SBS  Chr130432103G-AHOMOINTERGENIC
SBS  Chr131833974G-AHETINTRON
SBS  Chr1015475735G-AHETINTERGENIC
SBS  Chr106744846C-THOMOINTERGENIC
SBS  Chr112882704C-AHETINTERGENIC
SBS  Chr1127777349A-GHOMOINTERGENIC
SBS  Chr220042664T-AHETINTRON
SBS  Chr228321580T-AHETINTERGENIC
SBS  Chr37408759G-THETINTERGENIC
SBS  Chr43301668A-GHETINTERGENIC
SBS  Chr428627587G-AHOMONON_SYNONYMOUS_CODINGLOC_Os04g48094
SBS  Chr432789740T-CHOMOINTRON
SBS  Chr433140746G-THOMOINTERGENIC
SBS  Chr48309G-AHETINTRON
SBS  Chr520758489A-THETINTERGENIC
SBS  Chr52564211T-CHOMOINTERGENIC
SBS  Chr510157220C-THETNON_SYNONYMOUS_CODINGLOC_Os05g17650
SBS  Chr612524160A-THETINTERGENIC
SBS  Chr61072584C-THETINTERGENIC
SBS  Chr71041321G-AHOMOINTERGENIC
SBS  Chr720985606G-AHETINTERGENIC
SBS  Chr914573242A-CHOMOINTERGENIC
SBS  Chr914573237C-AHOMOINTERGENIC
SBS  Chr91520027A-THOMOINTERGENIC
SBS  Chr916905094A-THOMOINTERGENIC

Deletions: 18

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr111088771110887798
Deletion  Chr1136703091367032819
Deletion  Chr1016334340163343411
Deletion  Chr1016318275163182849
Deletion  Chr1212766941127669421
Deletion  Chr1223631372236313819
Deletion  Chr12228852012288521615
Deletion  Chr129034019034065
Deletion  Chr220999001210070008000LOC_Os02g35010
Deletion  Chr335034653350346607
Deletion  Chr333346428333464291LOC_Os03g58570
Deletion  Chr420596762205967664
Deletion  Chr5289289032892892118
Deletion  Chr626626474266264784
Deletion  Chr625668840256688411
Deletion  Chr8177544251775443813
Deletion  Chr82715024127150391150
Deletion  Chr9225523922255241018

Insertions: 2

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr430218057302180571
Insertion  Chr7265107826510781

Inversions: 3

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr22099925721011355
Inversion  Chr22100747121011361LOC_Os02g35010
Inversion  Chr3848634320431740