Mutant Information 

Mutant NameFN-247  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 24

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr105619500C-THOMONON_SYNONYMOUS_CODINGLOC_Os10g10214
SBS  Chr1117481232T-AHETINTRON
SBS  Chr1116502732A-GHETINTERGENIC
SBS  Chr1115542702A-GHETINTERGENIC
SBS  Chr1111007314G-AHETINTERGENIC
SBS  Chr1224242495C-THOMOINTERGENIC
SBS  Chr1215729029A-THETINTRON
SBS  Chr127236124G-AHOMOINTRON
SBS  Chr2869422G-THETINTERGENIC
SBS  Chr210467454G-THETNON_SYNONYMOUS_CODINGLOC_Os02g18040
SBS  Chr231367588G-AHOMOINTERGENIC
SBS  Chr332914661A-THOMOINTRON
SBS  Chr42839931G-AHOMOINTERGENIC
SBS  Chr427610504C-AHETINTRON
SBS  Chr55688480T-AHETINTRON
SBS  Chr617193382G-AHOMOINTERGENIC
SBS  Chr66987677A-GHOMOINTERGENIC
SBS  Chr614397566G-AHETINTERGENIC
SBS  Chr717733716G-AHETINTERGENIC
SBS  Chr715444095G-THETNON_SYNONYMOUS_CODINGLOC_Os07g26730
SBS  Chr814076997G-THETINTERGENIC
SBS  Chr8352162G-THETUTR_3_PRIME
SBS  Chr8352161A-THETUTR_3_PRIME
SBS  Chr912081052T-CHOMOINTRON

Deletions: 14

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr132980588329805979
Deletion  Chr1117415284174152862
Deletion  Chr1118772573187725818LOC_Os11g31940
Deletion  Chr25047001523900019200029
Deletion  Chr225236669252366745
Deletion  Chr223035264230352662
Deletion  Chr235256460352564644LOC_Os02g57540
Deletion  Chr329122928291229324
Deletion  Chr332270690322706966
Deletion  Chr434600032346030182986LOC_Os04g58100
Deletion  Chr43130542531335392299674
Deletion  Chr824728259247282601
Deletion  Chr81565015956306
Deletion  Chr980940018164000700006

Inversions: 4

Variant Type

Chromosome

Position1

Position2

Number of genes

Inversion  Chr12141477321823664LOC_Os01g38890
Inversion  Chr12141479321823675LOC_Os01g38890
Inversion  Chr111946126019462228
Inversion  Chr111946127319462242

Translocations: 4

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr89757756Chr434600030LOC_Os08g16010
Translocation  Chr810167266Chr434603013LOC_Os04g58100
Translocation  Chr817819113Chr1233600202
Translocation  Chr431305795Chr328340974LOC_Os04g52614