Mutant Information 

Mutant NameFN-248  [Download]
Generation M2
Genus species Oryza sativa
Cultivar Kitaake
Seed Availability Yes [Order Seeds]


Variant Information 

Single base substitutions: 36

Variant Type

Chromosome

Start_pos

Change

Genotype

Effect

Gene affected

SBS  Chr112512727C-THOMOINTRON
SBS  Chr121717642A-GHETINTERGENIC
SBS  Chr124958491G-CHOMOINTERGENIC
SBS  Chr125132925T-CHETUTR_5_PRIME
SBS  Chr130073941C-THETINTERGENIC
SBS  Chr104934277C-AHOMOINTERGENIC
SBS  Chr109602802G-THETINTERGENIC
SBS  Chr1114995971C-AHOMOINTERGENIC
SBS  Chr1121668664T-AHETINTERGENIC
SBS  Chr1211139203A-GHETINTRON
SBS  Chr1213452179G-CHETINTERGENIC
SBS  Chr1225117185T-CHOMOINTRON
SBS  Chr1226070815A-THOMOINTERGENIC
SBS  Chr1226481265G-AHOMOINTRON
SBS  Chr28535015C-THOMOINTERGENIC
SBS  Chr39025004C-AHETINTERGENIC
SBS  Chr37373223C-THETINTERGENIC
SBS  Chr330093921G-AHETINTERGENIC
SBS  Chr326339321T-GHOMOINTRON
SBS  Chr315822283C-THETINTERGENIC
SBS  Chr48857902G-CHOMOINTERGENIC
SBS  Chr416209704T-CHOMOINTRON
SBS  Chr522328632A-CHOMOINTERGENIC
SBS  Chr610345789G-AHETINTRON
SBS  Chr67043733C-AHETUTR_3_PRIME
SBS  Chr716987927T-CHETINTERGENIC
SBS  Chr726833401T-AHOMOINTRON
SBS  Chr710727347G-AHOMOINTRON
SBS  Chr715151937C-GHETNON_SYNONYMOUS_CODINGLOC_Os07g26360
SBS  Chr729276486A-THETINTRON
SBS  Chr718741373C-THETINTRON
SBS  Chr812359704G-THOMOINTERGENIC
SBS  Chr918836595C-THETINTERGENIC
SBS  Chr911711841T-CHETINTERGENIC
SBS  Chr911790680T-CHETNON_SYNONYMOUS_CODINGLOC_Os09g19700
SBS  Chr915885703A-GHETINTERGENIC

Deletions: 18

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Deletion  Chr18374173837418310
Deletion  Chr18476568476571
Deletion  Chr1045586545588419
Deletion  Chr10347837034783711
Deletion  Chr1120001978200019835
Deletion  Chr1222130012919000706000108
Deletion  Chr2299589729980112114LOC_Os02g06010
Deletion  Chr2844932084493255
Deletion  Chr218620001186200021
Deletion  Chr3413848941384901
Deletion  Chr3518053451805351
Deletion  Chr321274864212748662
Deletion  Chr5260885226088531
Deletion  Chr8150414231504143512
Deletion  Chr915955234159552362
Deletion  Chr9225152072251522013LOC_Os09g39200
Deletion  Chr9160212121602123119
Deletion  Chr91186300112670000807000120

Insertions: 4

Variant Type

Chromosome

Start_pos

End_pos

Size(bp)

Number of genes

Insertion  Chr1021491225214912252
Insertion  Chr221141579211415791
Insertion  Chr6689191368919133
Insertion  Chr615691606156916062

Translocations: 2

Variant Type

Chromosome

Position1

Chromosome

Position2

Number of genes

Translocation  Chr66663473Chr224434758LOC_Os02g40340
Translocation  Chr129135217Chr1107934282